Plasmids of two novel incompatibility groups IncFII <sub>pPROV114-NR</sub> and Inc <sub>pCHS4.1-3</sub> from <i>Providencia</i>

This study presents the genetic structure of two incompatibility (Inc) groups found in <i>Providencia</i>: the newly discovered IncFII<sub>pPROV114-NR</sub> and the newly designated Inc<sub>pCHS4.1-3</sub>. An extensive genomic comparison was performed on all 14 plasmids (three IncFII<sub>pPROV114-NR</sub> plasmids and 11 Inc<sub>pCHS4.1-3</sub> plasmids) from <i>Providencia</i>, including 12 newly sequenced in this study and two from GenBank. Three IncFII<sub>pPROV114-NR</sub> plasmids had similar conserved backbones but differed in accessory modules. The 11 Inc<sub>pCHS4.1-3</sub> plasmids fell into two groups according to differences in the conserved genes of the plasmid backbone. The accessory modules of 11 Inc<sub>pCHS4.1-3</sub> plasmids showed significant diversity, indicating numerous gene gains and losses, including in the Tn<i>1696-</i>related region, in Tn<i>7504</i>, in a 17.3-kb <i>sul2</i> region, and a 63.6-kb <i>bla</i><sub>NDM-1</sub> region. A minimum of 45 obtained antimicrobial resistance genes (ARGs) were identified in 13 of the 14 plasmids, covering resistance to 14 classes of antimicrobials and heavy metals. Five new mobile genetic elements (MGEs) were identified, including In2168, In1790, Tn<i>7500</i>, Tn<i>7501</i>, and Tn<i>7502</i>. Additionally, three MGEs, Tn<i>7499</i>, Tn<i>7503</i>, and Tn<i>7504</i> were newly designated. These two Inc group plasmids integrate abundant accessory modules that allow them to accumulate and distribute ARGs and improve the survivability of <i>Providencia</i> under the pressure of drug selection.

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Journal
Virulence
Published
2025-06-19
DOI
https://doi.org/10.1080/21505594.2025.2512034
Primary Topic
Antibiotic Resistance in Bacteria
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article
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article

Plasmids of two novel incompatibility groups IncFII pPROV114-NR and Inc pCHS4.1-3 from Providencia

Zhe Yin, Bo Gao, Dongsheng Zhou, Peng Wang et al.
Virulence
Antibiotic Resistance in Bacteria
article

Plasmids of two novel incompatibility groups IncFII pPROV114-NR and Inc pCHS4.1-3 from Providencia

Zhe Yin, Bo Gao, Dongsheng Zhou, Peng Wang, Yali Zheng, Fangzhou Chen, Jing Luo, Fan Yang, Jiaqi He, Xiuhui Lu, Kejiao Ma
article en

Abstract

This study presents the genetic structure of two incompatibility (Inc) groups found in <i>Providencia</i>: the newly discovered IncFII<sub>pPROV114-NR</sub> and the newly designated Inc<sub>pCHS4.1-3</sub>. An extensive genomic comparison was performed on all 14 plasmids (three IncFII<sub>pPROV114-NR</sub> plasmids and 11 Inc<sub>pCHS4.1-3</sub> plasmids) from <i>Providencia</i>, including 12 newly sequenced in this study and two from GenBank. Three IncFII<sub>pPROV114-NR</sub> plasmids had similar conserved backbones but differed in accessory modules. The 11 Inc<sub>pCHS4.1-3</sub> plasmids fell into two groups according to differences in the conserved genes of the plasmid backbone. The accessory modules of 11 Inc<sub>pCHS4.1-3</sub> plasmids showed significant diversity, indicating numerous gene gains and losses, including in the Tn<i>1696-</i>related region, in Tn<i>7504</i>, in a 17.3-kb <i>sul2</i> region, and a 63.6-kb <i>bla</i><sub>NDM-1</sub> region. A minimum of 45 obtained antimicrobial resistance genes (ARGs) were identified in 13 of the 14 plasmids, covering resistance to 14 classes of antimicrobials and heavy metals. Five new mobile genetic elements (MGEs) were identified, including In2168, In1790, Tn<i>7500</i>, Tn<i>7501</i>, and Tn<i>7502</i>. Additionally, three MGEs, Tn<i>7499</i>, Tn<i>7503</i>, and Tn<i>7504</i> were newly designated. These two Inc group plasmids integrate abundant accessory modules that allow them to accumulate and distribute ARGs and improve the survivability of <i>Providencia</i> under the pressure of drug selection.

VirulenceVol. 16(1)
Academy of Military Medical Sciences (CN), Chinese PLA General Hospital (CN), First Affiliated Hospital of Henan University (CN), Fujian Agriculture and Forestry University (CN), Yangzhou University (CN), Guangzhou Medical University (CN)
Zero hunger
Openalex Percentile: Top 89%
Antibiotic Resistance in Bacteria
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