PISAD: reference-free intraspecies sample anomalies detection tool based on <i>k</i>-mer counting
Our evaluation showed that PISAD achieves a lower data coverage requirement (0.5×) compared to the reference-based tool ntsm and is broadly applicable to multiple diploid species.
Authors
- Jianxin Wang (ORCID: https://orcid.org/0000-0003-1516-0480)
- XU Zheng-hua
- Fan Nie
Institutions
- Central South University (CN)
- Xiangtan University (CN)
- Xinjiang University (CN)
- Software (Spain) (ES)
Publication Details
- Journal
- GigaScience
- Published
- 2025-01-01
- DOI
- https://doi.org/10.1093/gigascience/giaf061
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Natural Science Foundation of China