Graphically Defined Model Reactions Are Extensible, Accurate, and Systematically Improvable
Achieving fast and accurate reaction prediction is central to a suite of chemical applications. Nevertheless, classic approaches based on templates or simple models are typically fast but with limited scope or accuracy, while the emerging machine learning-based models are limited in their transferability due to the lack of large reaction databases. Here, we address these limitations by formalizing the model reaction concept based on fixed-depth condensed reaction graphs that are shown to achieve a cost and accuracy balance that is applicable to many problems. The model reaction concept can be utilized to provide reliable predictions of activation energies and transition state geometries for a large range of organic reactions. In addition, using an alkane pyrolysis system as a benchmarking example, we show that the accuracy of the activation energy prediction can be further improved by adding correction terms based on the empirical Brønsted-Evans-Polanyi (BEP) relationship. These successful applications demonstrate that the model reaction can serve as a general tool to reduce the cost associated with ab initio transition state searches.
Authors
- Brett Matthew Savoie (ORCID: https://orcid.org/0000-0002-7039-4039)
- Qiyuan Zhao (ORCID: https://orcid.org/0000-0003-3228-8160)
- Veerupaksh Singla (ORCID: https://orcid.org/0000-0001-6300-2167)
- Hsuan‐Hao Hsu
Institutions
- University of Notre Dame (US)
- Davidson College (US)
- Purdue University West Lafayette (US)
Publication Details
- Journal
- Journal of Chemical Theory and Computation
- Published
- 2025-06-18
- DOI
- https://doi.org/10.1021/acs.jctc.5c00279
- Primary Topic
- Machine Learning in Materials Science
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Camille and Henry Dreyfus Foundation
- Purdue University
- Office of Naval Research