Transfer-Learning Deep Raman Models Using Semiempirical Quantum Chemistry

Biophotonic technologies such as Raman spectroscopy are powerful tools for obtaining highly specific molecular information. Due to its minimal sample preparation requirements, Raman spectroscopy is widely used across diverse scientific disciplines, often in combination with chemometrics, machine learning (ML), and deep learning (DL). However, Raman spectroscopy lacks large databases of independent Raman spectra for model training, leading to overfitting, overestimation, and limited model generalizability. We address this problem by generating simulated vibrational spectra using semiempirical quantum chemistry methods, enabling the efficient pretraining of deep learning models on large synthetic data sets. These pretrained models are then fine-tuned on a smaller experimental Raman data set of bacterial spectra. Transfer learning significantly reduces the computational cost while maintaining performance comparable to models trained from scratch in this real biophotonic application. The results validate the utility of synthetic data for pretraining deep Raman models and offer a scalable framework for spectral analysis in resource-limited settings.

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Publication Details

Journal
Journal of Chemical Information and Modeling
Published
2025-06-18
DOI
https://doi.org/10.1021/acs.jcim.5c00513
Citations
3
Primary Topic
Spectroscopy Techniques in Biomedical and Chemical Research
Type
article
Field-Weighted Citation Impact
4.90

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article

Transfer-Learning Deep Raman Models Using Semiempirical Quantum Chemistry

Julian Hniopek, Thomas Wilhelm Bocklitz, Jawad Kamran
3 citations
Journal of Chemical Information and Modeling
Spectroscopy Techniques in Biomedical and Chemical Research
4.90
article

Transfer-Learning Deep Raman Models Using Semiempirical Quantum Chemistry

Julian Hniopek, Thomas Wilhelm Bocklitz, Jawad Kamran
article en
3 citations

Abstract

Biophotonic technologies such as Raman spectroscopy are powerful tools for obtaining highly specific molecular information. Due to its minimal sample preparation requirements, Raman spectroscopy is widely used across diverse scientific disciplines, often in combination with chemometrics, machine learning (ML), and deep learning (DL). However, Raman spectroscopy lacks large databases of independent Raman spectra for model training, leading to overfitting, overestimation, and limited model generalizability. We address this problem by generating simulated vibrational spectra using semiempirical quantum chemistry methods, enabling the efficient pretraining of deep learning models on large synthetic data sets. These pretrained models are then fine-tuned on a smaller experimental Raman data set of bacterial spectra. Transfer learning significantly reduces the computational cost while maintaining performance comparable to models trained from scratch in this real biophotonic application. The results validate the utility of synthetic data for pretraining deep Raman models and offer a scalable framework for spectral analysis in resource-limited settings.

Journal of Chemical Information and ModelingVol. 65(13)
Helmholtz Institute Jena (DE), Leibniz Institute of Photonic Technology (DE), Friedrich Schiller University Jena (DE)
Bundesministerium für Bildung und Forschung, European Research Council
Openalex Percentile: Top 5%
Spectroscopy Techniques in Biomedical and Chemical Research
4.90
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Transfer-Learning Deep Raman Models Using Semiempirical Quantum Chemistry — Julian Hniopek, Thomas Wilhelm Bocklitz, et al. · Journal of Chemical Information and Modeling (2025) | TGRS Research Map | TGRS