A chromosome-level genome assembly of the Hermonassa cecilia (Lepidoptera: Noctuidae)

Hermonassa cecilia is a Lepidoptera pest primarily distributed in East Asia, belonging to the subfamily Noctuinae, which includes species that typically target and damage the underground parts of plants. However, there is limited information available on the life history and genomic resources of H. cecilia to date. In this study, we present a high-quality reference genome of H. cecilia generated using PacBio sequencing and Hi-C methods. The assembled genome size is 626.10 Mb, with a N50 of 21.00 Mb, and the contigs were mapped onto 31 chromosomes. BUSCO analysis indicated high genome completeness, with a score of 99.40%. We identified 281.45 Mb of repetitive sequences, which account for 44.21% of the genome, and annotated 22,662 protein-coding genes, 89.29% of which had functional annotations. This study represents the first assembly and annotation of the H. cecilia genome, providing a valuable resource for understanding its biological characteristics and offering significant potential for comparative genomics within the Noctuinae subfamily.

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Journal
Scientific Data
Published
2025-06-17
DOI
https://doi.org/10.1038/s41597-025-05340-x
Primary Topic
Insect Resistance and Genetics
Type
article
Field-Weighted Citation Impact
0.00

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article

A chromosome-level genome assembly of the Hermonassa cecilia (Lepidoptera: Noctuidae)

Chao Wu, Yutao Xiao, Zhiqiang Zhang, Lei Zhang et al.
Scientific Data
Insect Resistance and Genetics
article

A chromosome-level genome assembly of the Hermonassa cecilia (Lepidoptera: Noctuidae)

Chao Wu, Yutao Xiao, Zhiqiang Zhang, Lei Zhang, Xinyue Liang, Yao Tan, Jingang Liang, Chengyue Xian
article en

Abstract

Hermonassa cecilia is a Lepidoptera pest primarily distributed in East Asia, belonging to the subfamily Noctuinae, which includes species that typically target and damage the underground parts of plants. However, there is limited information available on the life history and genomic resources of H. cecilia to date. In this study, we present a high-quality reference genome of H. cecilia generated using PacBio sequencing and Hi-C methods. The assembled genome size is 626.10 Mb, with a N50 of 21.00 Mb, and the contigs were mapped onto 31 chromosomes. BUSCO analysis indicated high genome completeness, with a score of 99.40%. We identified 281.45 Mb of repetitive sequences, which account for 44.21% of the genome, and annotated 22,662 protein-coding genes, 89.29% of which had functional annotations. This study represents the first assembly and annotation of the H. cecilia genome, providing a valuable resource for understanding its biological characteristics and offering significant potential for comparative genomics within the Noctuinae subfamily.

Scientific DataVol. 12(1)
Inner Mongolia Agricultural University (CN), Agricultural Genomics Institute at Shenzhen (CN), China Rural Technology Development Center (CN), Ministry of Agriculture and Rural Affairs (CN)
National Natural Science Foundation of China, Agricultural Science and Technology Innovation Program
Openalex Percentile: Top 87%
Insect Resistance and Genetics
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A chromosome-level genome assembly of the Hermonassa cecilia (Lepidoptera: Noctuidae) — Chao Wu, Yutao Xiao, et al. · Scientific Data (2025) | TGRS Research Map | TGRS