Novel C5α-substituted carbapenems enhance <i>Mycobacterium abscessus</i> killing via selective target binding and reduced hydrolysis by Bla <sub>Mab</sub>

<i>Mycobacterium abscessus</i> (<i>Mab</i>) poses significant clinical challenges and underscores the urgent need for safer and more effective treatments, including β-lactams. Among currently available carbapenems, imipenem is widely used to treat <i>Mab</i> infections by combining with other antibiotics. Commercial carbapenems share a common scaffold with C2 modifications, whereas this study focuses on novel carbapenem candidates with C5α modifications. We evaluated their antibacterial activity against <i>Mab</i> ATCC 19977 and clinical isolates, as well as their acylation of peptidoglycan target receptors (L,D-transpeptidases [LDTs] and penicillin-binding proteins [PBPs]) and the β-lactamase enzyme Bla<sub>Mab</sub>. <i>In vitro</i> studies of two C5α-modified carbapenems, JDB/NA-1-157 and JDB/NA-1-208, revealed distinct antibacterial effects. JDB/NA-1-157 demonstrated potent bacterial killing with low minimum inhibitory concentrations (MICs; 0.125-8 mg/L) and near-complete eradication within 5 days, surpassing the efficacy of the standard-of-care regimen (amikacin + clarithromycin + imipenem). In contrast, JDB/NA-1-208 exhibited poor bacterial killing, with high MICs (16-256 mg/L) and limited efficacy in time-kill studies. However, JDB/NA-1-208 showed synergistic killing when combined with other β-lactams. Mechanistically, JDB/NA-1-208 is not a substrate for Bla<sub>Mab</sub>, while JDB/NA-1-157 is, albeit with low catalytic efficiency. This is supported by the observation that the addition of avibactam did not enhance synergy with JDB/NA-1-157. The substantial bacterial killing effect of JDB/NA-1-157 is attributed to its high binding affinity for PBP-B, PBP-lipo, PonA2, D,D-carboxypeptidase, and LDT1-2. These findings highlight the potential of novel C5α-modified carbapenems, particularly JDB/NA-1-157, as promising therapeutic candidates for <i>Mab</i> infections.

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Journal
Antimicrobial Agents and Chemotherapy
Published
2025-06-17
DOI
https://doi.org/10.1128/aac.00170-25
Primary Topic
Mycobacterium research and diagnosis
Type
article
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article

Novel C5α-substituted carbapenems enhance Mycobacterium abscessus killing via selective target binding and reduced hydrolysis by Bla Mab

Robert A. Bonomo, David C. Nguyen, Eunjeong Shin, John D. Buynak et al.
Antimicrobial Agents and Chemotherapy
Mycobacterium research and diagnosis
article

Novel C5α-substituted carbapenems enhance Mycobacterium abscessus killing via selective target binding and reduced hydrolysis by Bla Mab

Robert A. Bonomo, David C. Nguyen, Eunjeong Shin, John D. Buynak, Jonathan A. G. Cox, Eric J. Rubin, Magdalena A. Taracila, Arpit Parmar, Khalid M Dousa, Barry N. Kreiswirth, Md Mahbub Kabir Khan, Steven M. Holland, Dipal Patel, Mary Nantongo, Pojun Quan
article en

Abstract

<i>Mycobacterium abscessus</i> (<i>Mab</i>) poses significant clinical challenges and underscores the urgent need for safer and more effective treatments, including β-lactams. Among currently available carbapenems, imipenem is widely used to treat <i>Mab</i> infections by combining with other antibiotics. Commercial carbapenems share a common scaffold with C2 modifications, whereas this study focuses on novel carbapenem candidates with C5α modifications. We evaluated their antibacterial activity against <i>Mab</i> ATCC 19977 and clinical isolates, as well as their acylation of peptidoglycan target receptors (L,D-transpeptidases [LDTs] and penicillin-binding proteins [PBPs]) and the β-lactamase enzyme Bla<sub>Mab</sub>. <i>In vitro</i> studies of two C5α-modified carbapenems, JDB/NA-1-157 and JDB/NA-1-208, revealed distinct antibacterial effects. JDB/NA-1-157 demonstrated potent bacterial killing with low minimum inhibitory concentrations (MICs; 0.125-8 mg/L) and near-complete eradication within 5 days, surpassing the efficacy of the standard-of-care regimen (amikacin + clarithromycin + imipenem). In contrast, JDB/NA-1-208 exhibited poor bacterial killing, with high MICs (16-256 mg/L) and limited efficacy in time-kill studies. However, JDB/NA-1-208 showed synergistic killing when combined with other β-lactams. Mechanistically, JDB/NA-1-208 is not a substrate for Bla<sub>Mab</sub>, while JDB/NA-1-157 is, albeit with low catalytic efficiency. This is supported by the observation that the addition of avibactam did not enhance synergy with JDB/NA-1-157. The substantial bacterial killing effect of JDB/NA-1-157 is attributed to its high binding affinity for PBP-B, PBP-lipo, PonA2, D,D-carboxypeptidase, and LDT1-2. These findings highlight the potential of novel C5α-modified carbapenems, particularly JDB/NA-1-157, as promising therapeutic candidates for <i>Mab</i> infections.

Antimicrobial Agents and ChemotherapyVol. 69(8)
Rush University Medical Center (US), National Institutes of Health (US), Harvard University (US), Southern Methodist University (US), Geriatric Research Education and Clinical Center (US), Louis Stokes Cleveland VA Medical Center (US), National Institute of Allergy and Infectious Diseases (US), Hackensack Meridian Health (US), Center for Discovery (US), The Ohio State University (US), Case Western Reserve University (US)
Cystic Fibrosis Foundation, National Institute of Allergy and Infectious Diseases
Good health and well-being
Openalex Percentile: Top 80%
Mycobacterium research and diagnosis
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