Layer-Wise Training of Graph Neural Networks With Self-Supervised Learning

Training graph neural networks (GNNs) on large graphs is challenging due to both the high memory and computational costs of end-to-end training and the scarcity of detailed node-level annotations. To address these challenges, we propose layer-wise regularized graph infomax (LRGI), a self-supervised learning algorithm inspired by predictive coding, a biologically motivated principle in which each layer is trained locally to predict its future inputs. LRGI trains GNNs layer by layer, decoupling their memory and time complexity from the network depth, thereby enabling scalable training on large graphs. In LRGI, each layer learns to predict the features propagated from its neighbors, allowing independent training of each layer. This approach, combined with regularization that promotes diverse representations, also helps mitigate oversmoothing in deep GNNs. Experiments on large inductive graph benchmarks demonstrate that LRGI achieves competitive performance compared to state-of-the-art end-to-end methods, while substantially improving efficiency.

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Publication Details

Journal
IEEE Transactions on Neural Networks and Learning Systems
Published
2025-06-17
DOI
https://doi.org/10.1109/tnnls.2025.3577702
Citations
1
Primary Topic
Neural Networks and Applications
Type
article
Field-Weighted Citation Impact
2.48
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article

Layer-Wise Training of Graph Neural Networks With Self-Supervised Learning

Verónica Vilaplana, Oscar Pina
1 citations
IEEE Transactions on Neural Networks and Learning Systems
Neural Networks and Applications
2.48
article

Layer-Wise Training of Graph Neural Networks With Self-Supervised Learning

Verónica Vilaplana, Oscar Pina
article en
1 citations

Abstract

Training graph neural networks (GNNs) on large graphs is challenging due to both the high memory and computational costs of end-to-end training and the scarcity of detailed node-level annotations. To address these challenges, we propose layer-wise regularized graph infomax (LRGI), a self-supervised learning algorithm inspired by predictive coding, a biologically motivated principle in which each layer is trained locally to predict its future inputs. LRGI trains GNNs layer by layer, decoupling their memory and time complexity from the network depth, thereby enabling scalable training on large graphs. In LRGI, each layer learns to predict the features propagated from its neighbors, allowing independent training of each layer. This approach, combined with regularization that promotes diverse representations, also helps mitigate oversmoothing in deep GNNs. Experiments on large inductive graph benchmarks demonstrate that LRGI achieves competitive performance compared to state-of-the-art end-to-end methods, while substantially improving efficiency.

IEEE Transactions on Neural Networks and Learning SystemsVol. 36(10)
Universitat Politècnica de Catalunya (ES)
Openalex Percentile: Top 10%
Neural Networks and Applications
2.48
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