The Theoretical Calculations by DFT Method and Analysis ADME, Molecular Docking of 1-(1-(4-hydroxybutyl)-6-methyl-4-phenyl-2-thioxohexahydropyrimidin-5-yl)ethan-1-one (pyrimidine-thiones) Compound

Using Gaussian 09W software, the theoretically ideal molecular structure of 1-(1-(4-hydroxybutyl)-6-methyl-4-phenyl-2-thioxohexahydropyrimidin-5-yl)ethan-1-one (HMEP) compound was investigated. We investigated the compound's chemical reactivity and molecular structure using Density Functional Theory (DFT). Quantum chemical calculations were performed using DFT(B3LYP/6-311G(d,p) and DFT(B3LYP/LANL2DZ) basis sets and approaches. The reactive sites of the HMEP molecule were determined by creating molecular electrostatic potential (MEPS) maps. In order to investigate molecular charge transfer, HOMO and LUMO analyses were done. Through the use of NBO analysis, the stability of the molecule was examined in relation to charge hyperconjugative and delocalization interactions. In both cases, the same methodology and basis sets were used for molecular optimization. In continuation of the study, molecular analysis of the HMEP molecule was performed. SwissADME tools were used to predict the ADME profile of compounds showing appropriate values for absorption, distribution and metabolism. The results of this research indicate that it can be useful in the industry producing safe and effective pharmaceutical drugs.

Authors

Institutions

Publication Details

Journal
Osmaniye Korkut Ata Üniversitesi Fen Bilimleri Enstitüsü Dergisi
Published
2025-06-16
DOI
https://doi.org/10.47495/okufbed.1562370
Citations
3
Primary Topic
Synthesis and biological activity
Type
article
Field-Weighted Citation Impact
2.81
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

The Theoretical Calculations by DFT Method and Analysis ADME, Molecular Docking of 1-(1-(4-hydroxybutyl)-6-methyl-4-phenyl-2-thioxohexahydropyrimidin-5-yl)ethan-1-one (pyrimidine-thiones) Compound

Veysel Tahiroğlu, Efdal Çimen, Ümit Yıldıko, Kenan Gören
3 citations
Osmaniye Korkut Ata Üniversitesi Fen Bilimleri Enstitüsü Dergisi
Synthesis and biological activity
2.81
article

The Theoretical Calculations by DFT Method and Analysis ADME, Molecular Docking of 1-(1-(4-hydroxybutyl)-6-methyl-4-phenyl-2-thioxohexahydropyrimidin-5-yl)ethan-1-one (pyrimidine-thiones) Compound

Veysel Tahiroğlu, Efdal Çimen, Ümit Yıldıko, Kenan Gören
article en
3 citations

Abstract

Using Gaussian 09W software, the theoretically ideal molecular structure of 1-(1-(4-hydroxybutyl)-6-methyl-4-phenyl-2-thioxohexahydropyrimidin-5-yl)ethan-1-one (HMEP) compound was investigated. We investigated the compound's chemical reactivity and molecular structure using Density Functional Theory (DFT). Quantum chemical calculations were performed using DFT(B3LYP/6-311G(d,p) and DFT(B3LYP/LANL2DZ) basis sets and approaches. The reactive sites of the HMEP molecule were determined by creating molecular electrostatic potential (MEPS) maps. In order to investigate molecular charge transfer, HOMO and LUMO analyses were done. Through the use of NBO analysis, the stability of the molecule was examined in relation to charge hyperconjugative and delocalization interactions. In both cases, the same methodology and basis sets were used for molecular optimization. In continuation of the study, molecular analysis of the HMEP molecule was performed. SwissADME tools were used to predict the ADME profile of compounds showing appropriate values for absorption, distribution and metabolism. The results of this research indicate that it can be useful in the industry producing safe and effective pharmaceutical drugs.

Osmaniye Korkut Ata Üniversitesi Fen Bilimleri Enstitüsü DergisiVol. 8(3)
Kafkas University (TR), Şırnak University (TR)
Openalex Percentile: Top 10%
Synthesis and biological activity
2.81
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

The Theoretical Calculations by DFT Method and Analysis ADME, Molecular Docking of 1-(1-(4-hydroxybutyl)-6-methyl-4-phenyl-2-thioxohexahydropyrimidin-5-yl)ethan-1-one (pyrimidine-thiones) Compound — Veysel Tahiroğlu, Efdal Çimen, et al. · Osmaniye Korkut Ata Üniversitesi Fen Bilimleri Enstitüsü Dergisi (2025) | TGRS Research Map | TGRS