Detection of Cisplatin Resistance in Bladder Cancer Using Machine Learning

Bladder Cancer (BC) is the ninth most common cancer worldwide, with cisplatin-based chemotherapy being a standard treatment. However, the emergence of cisplatin resistance poses significant challenges, contributing to high recurrence rates. This study investigates the mechanisms of cisplatin resistance in BC through the application of Machine Learning (ML) models, including Association Rule Mining, K-mode Clustering, and Decision Tree Classifier. By analyzing large-scale genomic data, we uncover the molecular pathways driving resistance. Specifically, our findings show that hypermethylation of CpG islands, such as those in UCSC_CPG_ISLANDS and GENOME_BUILD_37, leads to reduced cell accessibility, contributing to cisplatin resistance. The ML models highlight strong associations between hypermethylation and cell inaccessibility, with 99% confidence. This work provides valuable insights into the role of methylation patterns in BC recurrence and offers potential for personalized therapeutic strategies aimed at overcoming cisplatin resistance and improving clinical outcomes.

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Publication Details

Journal
IEEE Access
Published
2025-01-01
DOI
https://doi.org/10.1109/access.2025.3580057
Primary Topic
Liver Disease Diagnosis and Treatment
Type
article
Field-Weighted Citation Impact
0.00
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article

Detection of Cisplatin Resistance in Bladder Cancer Using Machine Learning

Shanthala Lakshminarayana, Hyusim Park, Yuze Sun, Sungyong Jung et al.
IEEE Access
Liver Disease Diagnosis and Treatment
article

Detection of Cisplatin Resistance in Bladder Cancer Using Machine Learning

Shanthala Lakshminarayana, Hyusim Park, Yuze Sun, Sungyong Jung, Jayoung Kim, Mali Madhava Reddy, Mrudula Ranganatha
article en

Abstract

Bladder Cancer (BC) is the ninth most common cancer worldwide, with cisplatin-based chemotherapy being a standard treatment. However, the emergence of cisplatin resistance poses significant challenges, contributing to high recurrence rates. This study investigates the mechanisms of cisplatin resistance in BC through the application of Machine Learning (ML) models, including Association Rule Mining, K-mode Clustering, and Decision Tree Classifier. By analyzing large-scale genomic data, we uncover the molecular pathways driving resistance. Specifically, our findings show that hypermethylation of CpG islands, such as those in UCSC_CPG_ISLANDS and GENOME_BUILD_37, leads to reduced cell accessibility, contributing to cisplatin resistance. The ML models highlight strong associations between hypermethylation and cell inaccessibility, with 99% confidence. This work provides valuable insights into the role of methylation patterns in BC recurrence and offers potential for personalized therapeutic strategies aimed at overcoming cisplatin resistance and improving clinical outcomes.

IEEE AccessVol. 13
Cedars-Sinai Medical Center (US), South Dakota State University (US), The University of Texas at Arlington (US), University of North Texas at Dallas (US)
Good health and well-being
Openalex Percentile: Top 80%
Liver Disease Diagnosis and Treatment
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