Catalyst Phylogenetic Tree: A Visualization Tool for Exploring Catalyst Research and Development from Tabular Data

The rise of data-driven catalyst design has led to an increasing availability of curated catalyst datasets. These datasets likely contain historical trends that could guide research, but extracting such trends from high-dimensional, high-volume data remains challenging, limiting broader use beyond data scientists. This study proposes a catalyst phylogenetic tree, a pipelined method for visualizing vast catalyst data sets to provide an overview of their evolution. It groups catalysts by distinct elemental combinations, termed catalyst sets, and maps their physicochemical distances onto a phylogenetic tree. Applied to two publicly available datasets on oxidative coupling and dry reforming of methane, this method successfully identified catalyst lineages with similar designs emerging across different eras, as well as the standard catalyst designs for each lineage. This approach can be extended beyond catalyst data to various materials, maximizing the value of literature-based data curation and accelerating research and development across diverse fields.

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Publication Details

Journal
The Journal of Physical Chemistry Letters
Published
2025-06-16
DOI
https://doi.org/10.1021/acs.jpclett.5c01010
Primary Topic
Catalysis and Oxidation Reactions
Type
article
Field-Weighted Citation Impact
0.00

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article

Catalyst Phylogenetic Tree: A Visualization Tool for Exploring Catalyst Research and Development from Tabular Data

Sunao Nakanowatari, Toshiaki Taniike
The Journal of Physical Chemistry Letters
Catalysis and Oxidation Reactions
article

Catalyst Phylogenetic Tree: A Visualization Tool for Exploring Catalyst Research and Development from Tabular Data

Sunao Nakanowatari, Toshiaki Taniike
article en

Abstract

The rise of data-driven catalyst design has led to an increasing availability of curated catalyst datasets. These datasets likely contain historical trends that could guide research, but extracting such trends from high-dimensional, high-volume data remains challenging, limiting broader use beyond data scientists. This study proposes a catalyst phylogenetic tree, a pipelined method for visualizing vast catalyst data sets to provide an overview of their evolution. It groups catalysts by distinct elemental combinations, termed catalyst sets, and maps their physicochemical distances onto a phylogenetic tree. Applied to two publicly available datasets on oxidative coupling and dry reforming of methane, this method successfully identified catalyst lineages with similar designs emerging across different eras, as well as the standard catalyst designs for each lineage. This approach can be extended beyond catalyst data to various materials, maximizing the value of literature-based data curation and accelerating research and development across diverse fields.

The Journal of Physical Chemistry LettersVol. 16(25)
Japan Advanced Institute of Science and Technology (JP)
JST-Mirai Program
Openalex Percentile: Top 93%
Catalysis and Oxidation Reactions
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Catalyst Phylogenetic Tree: A Visualization Tool for Exploring Catalyst Research and Development from Tabular Data — Sunao Nakanowatari, Toshiaki Taniike · The Journal of Physical Chemistry Letters (2025) | TGRS Research Map | TGRS