Geometric Guidance Integrated with Directed Electrostatics Strategy within a Graph Neural Network Approach for Nanocluster Structure Prediction

We introduce the Geometric-DESIGNN method, which integrates Geometric Guidance with Directed Electrostatics Strategy within a Graph Neural Network framework to predict the stable configuration of nanoclusters on their potential energy surfaces. This approach merges the geometric and electronic strategies using graph neural network-based models to predict structures of large atomic clusters with specific size and point-group symmetries. This approach aids in constructing atomic metal cluster structures by predicting building frames through a geometric approach and locating the minima in the molecular electrostatic potential (MESP) landscape. By following alternate geometric and DESIGNN building strategies for each shell of parent clusters, we efficiently achieve close-packed daughter structures along their evolutionary paths. The geometric-DESIGNN approach is validated on the prototype Mg<sub><i>n</i></sub> clusters, by building structures for sizes up to <i>n</i> < 561. Furthermore, constraining the point-group symmetry of the parent clusters, we identify new symmetric isomers of medium to large Mg<sub><i>n</i></sub> clusters with <i>n</i> < 150. This methodology is also employed to construct stable Mg<sub><i>n</i></sub> nanoclusters with <i>n</i> = 332, 338, and 561. Benchmarking results show that the geometric-DESIGNN approach is an efficient tool for accelerated prediction of the nanocluster structure.

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Publication Details

Journal
The Journal of Physical Chemistry A
Published
2025-06-13
DOI
https://doi.org/10.1021/acs.jpca.5c02284
Citations
2
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
1.04

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article

Geometric Guidance Integrated with Directed Electrostatics Strategy within a Graph Neural Network Approach for Nanocluster Structure Prediction

Sridatri Nandy, K. V. Jovan Jose
2 citations
The Journal of Physical Chemistry A
Machine Learning in Materials Science
1.04
article

Geometric Guidance Integrated with Directed Electrostatics Strategy within a Graph Neural Network Approach for Nanocluster Structure Prediction

Sridatri Nandy, K. V. Jovan Jose
article en
2 citations

Abstract

We introduce the Geometric-DESIGNN method, which integrates Geometric Guidance with Directed Electrostatics Strategy within a Graph Neural Network framework to predict the stable configuration of nanoclusters on their potential energy surfaces. This approach merges the geometric and electronic strategies using graph neural network-based models to predict structures of large atomic clusters with specific size and point-group symmetries. This approach aids in constructing atomic metal cluster structures by predicting building frames through a geometric approach and locating the minima in the molecular electrostatic potential (MESP) landscape. By following alternate geometric and DESIGNN building strategies for each shell of parent clusters, we efficiently achieve close-packed daughter structures along their evolutionary paths. The geometric-DESIGNN approach is validated on the prototype Mg<sub><i>n</i></sub> clusters, by building structures for sizes up to <i>n</i> < 561. Furthermore, constraining the point-group symmetry of the parent clusters, we identify new symmetric isomers of medium to large Mg<sub><i>n</i></sub> clusters with <i>n</i> < 150. This methodology is also employed to construct stable Mg<sub><i>n</i></sub> nanoclusters with <i>n</i> = 332, 338, and 561. Benchmarking results show that the geometric-DESIGNN approach is an efficient tool for accelerated prediction of the nanocluster structure.

The Journal of Physical Chemistry AVol. 129(25)
University of Hyderabad (IN), Artificial Intelligence in Medicine (Canada) (CA)
Indian Institute of Science, University of Hyderabad, Science and Engineering Research Board
Openalex Percentile: Top 25%
Machine Learning in Materials Science
1.04
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Geometric Guidance Integrated with Directed Electrostatics Strategy within a Graph Neural Network Approach for Nanocluster Structure Prediction — Sridatri Nandy, K. V. Jovan Jose · The Journal of Physical Chemistry A (2025) | TGRS Research Map | TGRS