Development of a glycine-modified iron oxide nanoparticle-electrochemical biosensor for specific detection of <i>Klebsiella pneumoniae</i> DNA
This study presents a simple electrochemical DNA biosensor to accurately detect <i>Klebsiella pneumoniae</i> DNA. The biosensor uses glycine functionalized iron oxide nanoparticles (glycine@Fe<sub>3</sub>O<sub>4</sub>) to capture <i>Klebsiella pneumoniae</i> DNA. The as-synthesized nanoparticles were characterized using X-ray diffraction, X-ray photoelectron spectroscopy, Raman spectroscopy, and transmission electron microscopy, and created a sensitive electrode surface that produced strong electrochemical signals when DNA attached. Electrochemical techniques, including cyclic voltammetry and square wave voltammetry, were used to develop a biosensor for detecting <i>Klebsiella pneumoniae</i> DNA. The biosensor showed limits of detection of 3.27 nM in the 30-90 nM range and 3.94 nM in the 120-270 nM range, with limits of quantification of 3.90 nM and 11.95 nM, respectively. The sensitivity, determined from calibration curves, was 0.1009 μA nM<sup>-1</sup> for the low range and 0.0838 μA nM<sup>-1</sup> for the high range. The biosensor demonstrated high sensitivity and selectivity, effectively distinguishing the analyte from interferents like albumin and folic acid. Molecular docking showed strong DNA binding (-6 kcal mol<sup>-1</sup>). Lab tests confirmed detection of <i>Klebsiella pneumoniae</i> antimicrobial resistance genes (SHV, TEM, CTX-M, OXA-1) <i>via</i> PCR-based gel electrophoresis. This easy-to-use non-enzymatic biosensor offers fast, accurate, rapid, sensitive, and specific <i>Klebsiella pneumoniae</i> DNA detection, valuable for point-of-care diagnostics and antimicrobial resistance monitoring.
Authors
- Amol S. Vedpathak (ORCID: https://orcid.org/0000-0002-2182-2527)
- Tukaram D. Dongale (ORCID: https://orcid.org/0000-0003-2536-6132)
- Rajanish K. Kamat
- Yogendra Kumar Mishra (ORCID: https://orcid.org/0000-0002-8786-9379)
- Ravindra N. Bulakhe (ORCID: https://orcid.org/0000-0003-1112-2823)
- Somnath S. Kundale
- Ji Man Kim (ORCID: https://orcid.org/0000-0003-0860-4880)
- Rutuja Prashant Gambhir
- Arpita Tiwari (ORCID: https://orcid.org/0000-0002-2692-0011)
- Sohel B. Shaikh (ORCID: https://orcid.org/0000-0002-7415-4470)
Institutions
- Shivaji University (IN)
- University of Southern Denmark (DK)
- Homi Bhabha National Institute (IN)
- Symbiosis International University (IN)
- D.Y. Patil Education Society (IN)
- University of Newcastle Australia (AU)
- Sungkyunkwan University (KR)
Publication Details
- Journal
- Journal of Materials Chemistry B
- Published
- 2025-01-01
- DOI
- https://doi.org/10.1039/d5tb00377f
- Citations
- 3
- Primary Topic
- Advanced biosensing and bioanalysis techniques
- Type
- article
- Field-Weighted Citation Impact
- 2.42
Funders
- D.Y. Patil Education Society Institution Deemed to be University Kolhapur
- National Research Foundation
- National Research Foundation of Korea