Genome report: whole-genome assembly of the relapsing fever tick <i>Ornithodoros turicata</i> Dugès (Acari: Argasidae)
The soft tick family Argasidae contains vectors of medical and veterinary importance, but few molecular resources are available compared to hard ticks (Ixodidae). One example is Ornithodoros turicata, a recognized vector of Borrelia turicatae, causal agent of human relapsing fever, and a putative vector of African swine fever virus. To address the current lack of molecular resources for the Argasidae, we generated a chromosome-level genome assembly for O. turicata using PacBio sequencing in conjunction with an Illumina Hi-C library. The resulting reference genome has a total of 1.1 Gb in length and was assembled into 10 chromosomes and 368 unplaced scaffolds, an N50 of 2.7 Mb, and a QV score of 43.58. The orthology analysis indicated high-quality with a 97.8% BUSCO completeness score and 36,149 annotated genes. 33% of the genome was identified as repeats and masked. The generation of the first soft tick reference genome establishes a basis for future studies to utilize genomic tools to support vector-borne disease management.
Authors
- Anna K. Childers (ORCID: https://orcid.org/0000-0002-0747-8539)
- Alexander R. Kneubehl (ORCID: https://orcid.org/0000-0002-6243-4096)
- Brian E. Scheffler
- Mackenzie Tietjen (ORCID: https://orcid.org/0000-0001-7854-6845)
- Pete D. Teel (ORCID: https://orcid.org/0000-0003-0625-3028)
- Amanda R. Stahlke (ORCID: https://orcid.org/0000-0001-5724-598X)
- Perot Saelao (ORCID: https://orcid.org/0000-0003-1171-9187)
- Scott M. Geib (ORCID: https://orcid.org/0000-0002-9511-5139)
- David Luecke (ORCID: https://orcid.org/0000-0001-5309-9153)
- Sheina B. Sim (ORCID: https://orcid.org/0000-0003-0914-6914)
- Job E. López (ORCID: https://orcid.org/0000-0003-4802-5779)
Institutions
- Agricultural Research Service (US)
- Colorado Mesa University (US)
- Baylor College of Medicine (US)
- Beltsville Agricultural Research Center (US)
- Daniel K. Inouye U.S. Pacific Basin Agricultural Research Center (US)
- Knipling-Bushland U.S. Livestock Insects Research Laboratory (US)
Publication Details
- Journal
- G3 Genes Genomes Genetics
- Published
- 2025-06-13
- DOI
- https://doi.org/10.1093/g3journal/jkaf103
- Primary Topic
- Plant Virus Research Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- U.S. Department of Agriculture
- Agricultural Research Service