Abstract 1613 The E. coli gene YbjD functions in anti-phage defense

Bacteria have evolved numerous anti-phage defense systems, the most well-studied of which include CRISPR and restriction enzymes. Recently, genomic analyses have identified many other anti-phage defense systems. Multiple sequence alignment analysis shows that the E. coli gene YbjD is composed of an N-terminal ATPase of the ABC family, and a C-terminal nuclease of the Toprim family. This domain organization places YbjD in the Overcoming Lysogenization Defect (OLD) family of proteins, which have been shown to demonstrate phage defense in multi-gene systems such as the Gabija system or in retrons.

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Publication Details

Journal
Journal of Biological Chemistry
Published
2025-05-01
DOI
https://doi.org/10.1016/j.jbc.2025.109606
Primary Topic
Bacteriophages and microbial interactions
Type
article
Field-Weighted Citation Impact
0.00
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article

Abstract 1613 The E. coli gene YbjD functions in anti-phage defense

Bryan H. Thurtle-Schmidt, J. Polster, Leslie Atahualpa
Journal of Biological Chemistry
Bacteriophages and microbial interactions
article

Abstract 1613 The E. coli gene YbjD functions in anti-phage defense

Bryan H. Thurtle-Schmidt, J. Polster, Leslie Atahualpa
article en

Abstract

Bacteria have evolved numerous anti-phage defense systems, the most well-studied of which include CRISPR and restriction enzymes. Recently, genomic analyses have identified many other anti-phage defense systems. Multiple sequence alignment analysis shows that the E. coli gene YbjD is composed of an N-terminal ATPase of the ABC family, and a C-terminal nuclease of the Toprim family. This domain organization places YbjD in the Overcoming Lysogenization Defect (OLD) family of proteins, which have been shown to demonstrate phage defense in multi-gene systems such as the Gabija system or in retrons.

Journal of Biological ChemistryVol. 301(5)
Bridge University (SS)
Openalex Percentile: Top 86%
Bacteriophages and microbial interactions
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