Abstract 1743 Nanopore sequencing of intact aminoacylated tRNAs
Transfer RNAs (tRNA) are decorated during biogenesis with a variety of modifications that modulate their stability, aminoacylation, and decoding potential during translation. The complex landscape of tRNA modification presents significant analysis challenges and to date no single approach enables the simultaneous measurement of important but disparate chemical properties of individual, mature tRNA molecules. We developed a new, integrated approach to analyze the sequence, modification, and aminoacylation state of tRNA molecules in a high throughput nanopore sequencing experiment, leveraging a chemical ligation that embeds the charged amino acid in an adapted tRNA molecule.
Authors
- Aleksandar Radakovic (ORCID: https://orcid.org/0000-0003-3794-3822)
- Laura White
- Jack W. Szostak (ORCID: https://orcid.org/0000-0003-4131-1203)
- Jay R. Hesselberth (ORCID: https://orcid.org/0000-0002-6299-179X)
- Marcin Piotr Sajek (ORCID: https://orcid.org/0000-0002-4115-4191)
- Kezia Dobson
Institutions
- University School of Milwaukee (US)
- University of Wisconsin–Milwaukee (US)
Publication Details
- Journal
- Journal of Biological Chemistry
- Published
- 2025-05-01
- DOI
- https://doi.org/10.1016/j.jbc.2025.109750
- Primary Topic
- RNA modifications and cancer
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Institutes of Health