Abstract 2805 The annotation of several venom genes from the parasitoid wasp Ganaspis sp

The fruit fly, Drosophila melanogaster, are frequently infected with venom from various parasitoid wasps. During host infection, parasitoid wasps inject their venom and eggs into fly larvae resulting in a suppressed immune response and the developing wasp will eventually terminate the fly host. Genes within Ganaspis sp. that encode virulence proteins were identified by a transcriptomic-proteomic approach (Mortimer et al., 2013; Goecks et al., 2013). This research focuses on annotating several of these venom genes using a variety of software tools provided by the contributors of the Genomics Education Partnership (GEP) project such as: the UCSC Genome browser, tblastn, Gene Record Finder, FlyBase and Gene Model Checker in order to facilitate the identification of gene models and their subsequent annotations.

Authors

Publication Details

Journal
Journal of Biological Chemistry
Published
2025-05-01
DOI
https://doi.org/10.1016/j.jbc.2025.109820
Primary Topic
Insect and Pesticide Research
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Abstract 2805 The annotation of several venom genes from the parasitoid wasp Ganaspis sp

Ian M. MacDonald, Ken Saville, Z Estrada Reyes, Patrick Tolsma
Journal of Biological Chemistry
Insect and Pesticide Research
article

Abstract 2805 The annotation of several venom genes from the parasitoid wasp Ganaspis sp

Ian M. MacDonald, Ken Saville, Z Estrada Reyes, Patrick Tolsma
article en

Abstract

The fruit fly, Drosophila melanogaster, are frequently infected with venom from various parasitoid wasps. During host infection, parasitoid wasps inject their venom and eggs into fly larvae resulting in a suppressed immune response and the developing wasp will eventually terminate the fly host. Genes within Ganaspis sp. that encode virulence proteins were identified by a transcriptomic-proteomic approach (Mortimer et al., 2013; Goecks et al., 2013). This research focuses on annotating several of these venom genes using a variety of software tools provided by the contributors of the Genomics Education Partnership (GEP) project such as: the UCSC Genome browser, tblastn, Gene Record Finder, FlyBase and Gene Model Checker in order to facilitate the identification of gene models and their subsequent annotations.

Journal of Biological ChemistryVol. 301(5)
Openalex Percentile: Top 88%
Insect and Pesticide Research
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.