Kinetic modeling of enzymatic fluorescence retrieval of a fluorogenic probe for Penicillin-G-Acylase
This work presents the development and validation of a kinetic model describing the enzymatic hydrolysis of a specifically designed fluorogenic probe for free Penicillin-G Acylase (PGA). The model construction involved tracking reaction kinetics through UV–Vis spectroscopy, identifying product-induced inhibitory effects, and employing initial velocity analysis alongside parameter estimation techniques. The kinetic model was structured around a simple ordered uni-bi mechanism comprising three reversible reaction steps. Validation of the model was performed through spectrofluorometric measurements, successfully predicting the fluorescence intensity progression resulting from the enzymatic cleavage of the probe. • Engineered a kinetic model for enzymatic hydrolysis by PGA with a fluorogenic probe. • Quantified fluorescence via UV–Vis and spectrofluorometry to monitor activity. • Simulated an ordered uni-bi mechanism with reversible steps and product inhibition. • Matched model predictions to measured fluorescence with high quantitative accuracy. • Enabled biosensing applications using fluorogenic probes in drug delivery systems.
Authors
- Jan H. van Esch (ORCID: https://orcid.org/0000-0001-6116-4808)
- Yu Wang (ORCID: https://orcid.org/0000-0001-5971-6597)
- Nektarios Katsas
- Ardeshir Roshanasan
Institutions
- University of Patras (GR)
- Guangzhou Electronic Technology (China) (CN)
- Delft University of Technology (NL)
Publication Details
- Journal
- Biochemical Engineering Journal
- Published
- 2025-06-11
- DOI
- https://doi.org/10.1016/j.bej.2025.109780
- Primary Topic
- Protein Interaction Studies and Fluorescence Analysis
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- H2020 Marie Skłodowska-Curie Actions