Kinetic modeling of enzymatic fluorescence retrieval of a fluorogenic probe for Penicillin-G-Acylase

This work presents the development and validation of a kinetic model describing the enzymatic hydrolysis of a specifically designed fluorogenic probe for free Penicillin-G Acylase (PGA). The model construction involved tracking reaction kinetics through UV–Vis spectroscopy, identifying product-induced inhibitory effects, and employing initial velocity analysis alongside parameter estimation techniques. The kinetic model was structured around a simple ordered uni-bi mechanism comprising three reversible reaction steps. Validation of the model was performed through spectrofluorometric measurements, successfully predicting the fluorescence intensity progression resulting from the enzymatic cleavage of the probe. • Engineered a kinetic model for enzymatic hydrolysis by PGA with a fluorogenic probe. • Quantified fluorescence via UV–Vis and spectrofluorometry to monitor activity. • Simulated an ordered uni-bi mechanism with reversible steps and product inhibition. • Matched model predictions to measured fluorescence with high quantitative accuracy. • Enabled biosensing applications using fluorogenic probes in drug delivery systems.

Authors

Institutions

Publication Details

Journal
Biochemical Engineering Journal
Published
2025-06-11
DOI
https://doi.org/10.1016/j.bej.2025.109780
Primary Topic
Protein Interaction Studies and Fluorescence Analysis
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Kinetic modeling of enzymatic fluorescence retrieval of a fluorogenic probe for Penicillin-G-Acylase

Jan H. van Esch, Yu Wang, Nektarios Katsas, Ardeshir Roshanasan
Biochemical Engineering Journal
Protein Interaction Studies and Fluorescence Analysis
article

Kinetic modeling of enzymatic fluorescence retrieval of a fluorogenic probe for Penicillin-G-Acylase

Jan H. van Esch, Yu Wang, Nektarios Katsas, Ardeshir Roshanasan
article en

Abstract

This work presents the development and validation of a kinetic model describing the enzymatic hydrolysis of a specifically designed fluorogenic probe for free Penicillin-G Acylase (PGA). The model construction involved tracking reaction kinetics through UV–Vis spectroscopy, identifying product-induced inhibitory effects, and employing initial velocity analysis alongside parameter estimation techniques. The kinetic model was structured around a simple ordered uni-bi mechanism comprising three reversible reaction steps. Validation of the model was performed through spectrofluorometric measurements, successfully predicting the fluorescence intensity progression resulting from the enzymatic cleavage of the probe. • Engineered a kinetic model for enzymatic hydrolysis by PGA with a fluorogenic probe. • Quantified fluorescence via UV–Vis and spectrofluorometry to monitor activity. • Simulated an ordered uni-bi mechanism with reversible steps and product inhibition. • Matched model predictions to measured fluorescence with high quantitative accuracy. • Enabled biosensing applications using fluorogenic probes in drug delivery systems.

Biochemical Engineering JournalVol. 222
University of Patras (GR), Guangzhou Electronic Technology (China) (CN), Delft University of Technology (NL)
H2020 Marie Skłodowska-Curie Actions
Openalex Percentile: Top 88%
Protein Interaction Studies and Fluorescence Analysis
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.