Antimicrobial evaluation, molecular docking, DFT analysis, and ADME studies of 3-Hydroxypyridin-4-one analogues

A series of 3-hydroxypyridine-4-one analogues (5a–r, 6a–r) were evaluated for their antimicrobial activities against a broad panel of bacterial ( E. coli, S. typhi, P. aeruginosa, B. subtilis, K. pneumoniae, and S. aureus ) and fungal ( C. albicans, A. niger, C. krusei, C. tropicalis, C. glabrata, C. parapsilosis, C. dublinensis, Cryptococcus neoformans, and Aspergillus flavus ) species using the CLSI method. The studied compounds exhibited moderate to good antibacterial activity, with 5a–r generally outperforming 6a–r analogues. Notably, chlorine substitutions at the ortho and para positions of the phenyl ring (compounds 5d and 5o ) significantly enhanced activity against E. coli (MIC = 32 μg/mL). Thiophene substitution ( 6j ) improved potency against S. typhi and P. aeruginosa . Antifungal evaluation revealed that compounds bearing hydroxyl and isopropyl substituents, as well as thiophene and furan moieties, exhibited potent activity, with compound 5 l showing remarkable efficacy against C. krusei (MIC = 2 μg/mL) and compound 6b outperforming fluconazole against C. parapsilosis (MIC = 0.5 μg/mL). Molecular docking studies supported these findings by demonstrating strong binding affinities of potent compounds to bacterial Gyrase B and fungal sterol 14-alpha demethylase (CYP51). Density Functional Theory (DFT) calculations further elucidated the electronic properties correlating with reactivity and stability. These results highlight the critical role of Ar position substitutions in modulating antimicrobial activity and offer promising leads for the development of novel antibacterial and antifungal agents. • A series of 3-hydroxypyridine-4-ones was screened for antimicrobial activity against various Gram-positive and Gram-negative bacteria, as well as several fungal species. • The results of the antimicrobial screening revealed that compounds 5d and 5o exhibited the most significant inhibitory effects against E. coli , with MIC value of 32 μg/mL. • Several of the studied compounds demonstrated favorable antifungal effects, with MICs ranging from 0.5 to 8 μg/mL against several tested fungal species. • To determine the interactions and binding free energy, molecular docking study and was performed.

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Publication Details

Journal
Results in Chemistry
Published
2025-06-11
DOI
https://doi.org/10.1016/j.rechem.2025.102447
Citations
1
Primary Topic
Synthesis and biological activity
Type
article
Field-Weighted Citation Impact
0.94

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article

Antimicrobial evaluation, molecular docking, DFT analysis, and ADME studies of 3-Hydroxypyridin-4-one analogues

Marzieh Jamali, Zahra Zareshahrabadi, Hossein Sadeghpour, Fatemeh Zare et al.
1 citations
Results in Chemistry
Synthesis and biological activity
0.94
article

Antimicrobial evaluation, molecular docking, DFT analysis, and ADME studies of 3-Hydroxypyridin-4-one analogues

Marzieh Jamali, Zahra Zareshahrabadi, Hossein Sadeghpour, Fatemeh Zare, Kamiar Zomorodian, Sara Sadeghian, Razieh Sabet, Narjes Moghtaderi Estahbanati
article en
1 citations

Abstract

A series of 3-hydroxypyridine-4-one analogues (5a–r, 6a–r) were evaluated for their antimicrobial activities against a broad panel of bacterial ( E. coli, S. typhi, P. aeruginosa, B. subtilis, K. pneumoniae, and S. aureus ) and fungal ( C. albicans, A. niger, C. krusei, C. tropicalis, C. glabrata, C. parapsilosis, C. dublinensis, Cryptococcus neoformans, and Aspergillus flavus ) species using the CLSI method. The studied compounds exhibited moderate to good antibacterial activity, with 5a–r generally outperforming 6a–r analogues. Notably, chlorine substitutions at the ortho and para positions of the phenyl ring (compounds 5d and 5o ) significantly enhanced activity against E. coli (MIC = 32 μg/mL). Thiophene substitution ( 6j ) improved potency against S. typhi and P. aeruginosa . Antifungal evaluation revealed that compounds bearing hydroxyl and isopropyl substituents, as well as thiophene and furan moieties, exhibited potent activity, with compound 5 l showing remarkable efficacy against C. krusei (MIC = 2 μg/mL) and compound 6b outperforming fluconazole against C. parapsilosis (MIC = 0.5 μg/mL). Molecular docking studies supported these findings by demonstrating strong binding affinities of potent compounds to bacterial Gyrase B and fungal sterol 14-alpha demethylase (CYP51). Density Functional Theory (DFT) calculations further elucidated the electronic properties correlating with reactivity and stability. These results highlight the critical role of Ar position substitutions in modulating antimicrobial activity and offer promising leads for the development of novel antibacterial and antifungal agents. • A series of 3-hydroxypyridine-4-ones was screened for antimicrobial activity against various Gram-positive and Gram-negative bacteria, as well as several fungal species. • The results of the antimicrobial screening revealed that compounds 5d and 5o exhibited the most significant inhibitory effects against E. coli , with MIC value of 32 μg/mL. • Several of the studied compounds demonstrated favorable antifungal effects, with MICs ranging from 0.5 to 8 μg/mL against several tested fungal species. • To determine the interactions and binding free energy, molecular docking study and was performed.

Results in ChemistryVol. 16
Shiraz University of Medical Sciences (IR)
Shiraz University of Medical Sciences
Openalex Percentile: Top 25%
Synthesis and biological activity
0.94
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