Mechanism of the Oxygen-Evolving Process in the Water-Oxidizing Complex of Photosystem II, as Revealed by Time-Resolved Infrared Spectroscopy

The molecular mechanism of photosynthetic water oxidation in photosystem II was investigated, focusing on the elusive O<sub>2</sub>-evolving S<sub>3</sub> → S<sub>0</sub> transition using time-resolved infrared spectroscopy, supported by quantum mechanics/molecular mechanics calculations. It was suggested that the initial ∼ 200 μs phase, which was significantly retarded by Cl<sup>-</sup> → NO<sub>3</sub><sup>-</sup> substitution but not much by Ca<sup>2+</sup> → Sr<sup>2+</sup> substitution, is attributed to proton release from W1, promoted by Y<sub>Z</sub> oxidation, via the Cl-1 channel. The resultant W1 = OH<sup>-</sup> form is in thermal equilibrium with the W2 = OH<sup>-</sup> form. The slow millisecond phase was significantly retarded by both Sr<sup>2+</sup> and NO<sub>3</sub><sup>-</sup> substitutions, maintaining electron transfer to Y<sub>Z</sub><sup>•</sup> as the rate-limiting step even in very slow kinetics with simultaneous Sr<sup>2+</sup>/NO<sub>3</sub><sup>-</sup> substitution, indicating that the hydrogen-bond network of water molecules between the Cl and Ca sites plays a crucial role in the electron transfer to form the transient S<sub>4</sub> state. It is proposed that electron transfer is coupled with internal proton transfer from O6H<sup>-</sup> to W2(OH<sup>-</sup>) through this hydrogen-bond network. These results highlight the key role of the hydrogen-bond network in the catalytic site in the molecular mechanism of the O<sub>2</sub>-evolving process, the slowest step in photosynthetic water oxidation.

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Publication Details

Journal
The Journal of Physical Chemistry B
Published
2025-06-11
DOI
https://doi.org/10.1021/acs.jpcb.5c02806
Citations
5
Primary Topic
Photosynthetic Processes and Mechanisms
Type
article
Field-Weighted Citation Impact
4.03

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article

Mechanism of the Oxygen-Evolving Process in the Water-Oxidizing Complex of Photosystem II, as Revealed by Time-Resolved Infrared Spectroscopy

Takumi Noguchi, Ryo Nagao, Koji Sugie, Yuki Kato
5 citations
The Journal of Physical Chemistry B
Photosynthetic Processes and Mechanisms
4.03
article

Mechanism of the Oxygen-Evolving Process in the Water-Oxidizing Complex of Photosystem II, as Revealed by Time-Resolved Infrared Spectroscopy

Takumi Noguchi, Ryo Nagao, Koji Sugie, Yuki Kato
article en
5 citations

Abstract

The molecular mechanism of photosynthetic water oxidation in photosystem II was investigated, focusing on the elusive O<sub>2</sub>-evolving S<sub>3</sub> → S<sub>0</sub> transition using time-resolved infrared spectroscopy, supported by quantum mechanics/molecular mechanics calculations. It was suggested that the initial ∼ 200 μs phase, which was significantly retarded by Cl<sup>-</sup> → NO<sub>3</sub><sup>-</sup> substitution but not much by Ca<sup>2+</sup> → Sr<sup>2+</sup> substitution, is attributed to proton release from W1, promoted by Y<sub>Z</sub> oxidation, via the Cl-1 channel. The resultant W1 = OH<sup>-</sup> form is in thermal equilibrium with the W2 = OH<sup>-</sup> form. The slow millisecond phase was significantly retarded by both Sr<sup>2+</sup> and NO<sub>3</sub><sup>-</sup> substitutions, maintaining electron transfer to Y<sub>Z</sub><sup>•</sup> as the rate-limiting step even in very slow kinetics with simultaneous Sr<sup>2+</sup>/NO<sub>3</sub><sup>-</sup> substitution, indicating that the hydrogen-bond network of water molecules between the Cl and Ca sites plays a crucial role in the electron transfer to form the transient S<sub>4</sub> state. It is proposed that electron transfer is coupled with internal proton transfer from O6H<sup>-</sup> to W2(OH<sup>-</sup>) through this hydrogen-bond network. These results highlight the key role of the hydrogen-bond network in the catalytic site in the molecular mechanism of the O<sub>2</sub>-evolving process, the slowest step in photosynthetic water oxidation.

The Journal of Physical Chemistry BVol. 129(25)
Nagoya University (JP)
Japan Society for the Promotion of Science
Openalex Percentile: Top 6%
Photosynthetic Processes and Mechanisms
4.03
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Mechanism of the Oxygen-Evolving Process in the Water-Oxidizing Complex of Photosystem II, as Revealed by Time-Resolved Infrared Spectroscopy — Takumi Noguchi, Ryo Nagao, et al. · The Journal of Physical Chemistry B (2025) | TGRS Research Map | TGRS