Relative knot probabilities in confined lattice polygons
In this paper we examine the relative knotting probabilities in a lattice model of ring polymers confined in a cavity. The model is of a lattice knot of size n in the cubic lattice, confined to a cube of side length L and with volume V=(L+1)^{3} sites. We use Monte Carlo algorithms to estimate approximately the number of conformations of lattice knots in the confining cube. If p_{n,L}(K) is the number of conformations of a lattice polygon of length n and knot type K in a cube of volume L^{3}, then the relative knotting probability of a lattice polygon to have knot type K, relative to the probability that the polygon is the unknot (the trivial knot, denoted by 0_{1}), is ρ_{n,L}(K/0_{1})=p_{n,L}(K)/p_{n,L}(0_{1}). We determine ρ_{n,L}(K/0_{1}) for various knot types K up to six crossing knots. Our data show that these relative knotting probabilities are small over a wide range of the concentration φ=n/V of monomers for values of L≤12 so that the model is dominated by unknotted lattice polygons. Moreover, the relative knot probability increases with φ along a curve that flattens as the Hamiltonian state is approached.
Authors
- Maria Carla Tesi (ORCID: https://orcid.org/0000-0003-1451-6895)
- E J Janse van Rensburg (ORCID: https://orcid.org/0000-0003-4366-634X)
- Enzo Orlandini (ORCID: https://orcid.org/0000-0003-3680-9488)
Institutions
- University of Padua (IT)
- York University (CA)
- University of Bologna (IT)
Publication Details
- Journal
- Physical review. E
- Published
- 2025-06-09
- DOI
- https://doi.org/10.1103/physreve.111.065406
- Primary Topic
- Computational Geometry and Mesh Generation
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Gruppo Nazionale per l'Analisi Matematica, la Probabilità e le loro Applicazioni
- Natural Sciences and Engineering Research Council of Canada