Multi‐Omics Identification of Extracellular Components of the Fetal Monkey and Human Neocortex

During development, precursor cells are continuously and intimately interacting with their extracellular environment, which guides their ability to generate functional tissues and organs. Much is known about the development of the neocortex in mammals. This information has largely been derived from histological analyses, heterochronic cell transplants, and genetic manipulations in mice, and to a lesser extent from transcriptomic and histological analyses in humans. However, these approaches have not led to a characterization of the extracellular composition of the developing neocortex in any species. Here, using a combination of single-cell transcriptomic analyses from published datasets and our proteomics and immunohistofluorescence analyses, we provide a more comprehensive and unbiased picture of the early developing fetal neocortex in humans and non-human primates. Our findings provide a starting point for further hypothesis-driven studies on structural and signaling components in the developing cortex that had previously not been identified.

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Publication Details

Journal
PROTEOMICS
Published
2025-06-09
DOI
https://doi.org/10.1002/pmic.202400385
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
0.00

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article

Multi‐Omics Identification of Extracellular Components of the Fetal Monkey and Human Neocortex

Steven Lisgo, Jessica Atrio, Emma Smith, Hallie N. Nelson et al.
PROTEOMICS
Single-cell and spatial transcriptomics
article

Multi‐Omics Identification of Extracellular Components of the Fetal Monkey and Human Neocortex

Steven Lisgo, Jessica Atrio, Emma Smith, Hallie N. Nelson, Alexandra Quezada, Nadjeda Moreno, Jon D. Hennebold, Simone Sidoli, Ian A. Glass, Nita Solanky, Aragorn Jones, Nadiya Nawsheen, Neel Patel, Felipe Vilicich, Dhanya Vettiatil, Susan Pesci, Melinda Murphy, Nerys Benfield, Seth Kattapong‐Graber, Elizabeth G. Gurney
article en

Abstract

During development, precursor cells are continuously and intimately interacting with their extracellular environment, which guides their ability to generate functional tissues and organs. Much is known about the development of the neocortex in mammals. This information has largely been derived from histological analyses, heterochronic cell transplants, and genetic manipulations in mice, and to a lesser extent from transcriptomic and histological analyses in humans. However, these approaches have not led to a characterization of the extracellular composition of the developing neocortex in any species. Here, using a combination of single-cell transcriptomic analyses from published datasets and our proteomics and immunohistofluorescence analyses, we provide a more comprehensive and unbiased picture of the early developing fetal neocortex in humans and non-human primates. Our findings provide a starting point for further hypothesis-driven studies on structural and signaling components in the developing cortex that had previously not been identified.

PROTEOMICSVol. 25(13)
Oregon National Primate Research Center (US), Albert Einstein College of Medicine (US), Oregon Health & Science University (US), University of Washington (US), Great Ormond Street Hospital (GB), Montefiore Health System (US), University College London (GB), Newcastle University (GB)
National Institute of Child Health and Human Development
Life in Land
Openalex Percentile: Top 88%
Single-cell and spatial transcriptomics
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