Chromosome-level genome assembly and annotation of the maize weevil (Sitophilus zeamais Motschulsky)

The maize weevil, Sitophilus zeamais Motschulsky, is one of the most destructive pests of stored grains worldwide, posing a significant threat to global food security. To better understand the biology, resistance mechanism, and adaptive evolution of this species, we presented a high-quality chromosome-level genome assembly of S. zeamais using PacBio sequencing and Hi-C technologies. The size of the final assembled genome was 693.21 Mb with scaffold N50 of 61.03 Mb, and 631.97 Mb were successfully anchored into 11 pseudochromosomes. In total, 15,161 protein-coding genes were annotated, of which 98.89% obtained functional descriptions. Additionally, 377.50 Mb of sequences were identified as repeat elements, accounting for 54.46% of the genome. BUSCO analysis revealed a high level of completeness in both the genome assembly and annotation, with scores of 98.17% and 97.22%, respectively. The chromosome-level genome of S. zeamais provides valuable genomic insights that deepen our understanding of the evolution and ecology of Sitophilus species, while also contributing to the development of targeted and innovative control strategies for stored-product pests.

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Publication Details

Journal
Scientific Data
Published
2025-06-09
DOI
https://doi.org/10.1038/s41597-025-05341-w
Primary Topic
Insect Resistance and Genetics
Type
article
Field-Weighted Citation Impact
0.00

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article

Chromosome-level genome assembly and annotation of the maize weevil (Sitophilus zeamais Motschulsky)

Guiyao Wang, Chao Zhao, Fangfang Zeng, Yongsheng Bai et al.
Scientific Data
Insect Resistance and Genetics
article

Chromosome-level genome assembly and annotation of the maize weevil (Sitophilus zeamais Motschulsky)

Guiyao Wang, Chao Zhao, Fangfang Zeng, Yongsheng Bai, Shuai Pang, Meng Zhang
article en

Abstract

The maize weevil, Sitophilus zeamais Motschulsky, is one of the most destructive pests of stored grains worldwide, posing a significant threat to global food security. To better understand the biology, resistance mechanism, and adaptive evolution of this species, we presented a high-quality chromosome-level genome assembly of S. zeamais using PacBio sequencing and Hi-C technologies. The size of the final assembled genome was 693.21 Mb with scaffold N50 of 61.03 Mb, and 631.97 Mb were successfully anchored into 11 pseudochromosomes. In total, 15,161 protein-coding genes were annotated, of which 98.89% obtained functional descriptions. Additionally, 377.50 Mb of sequences were identified as repeat elements, accounting for 54.46% of the genome. BUSCO analysis revealed a high level of completeness in both the genome assembly and annotation, with scores of 98.17% and 97.22%, respectively. The chromosome-level genome of S. zeamais provides valuable genomic insights that deepen our understanding of the evolution and ecology of Sitophilus species, while also contributing to the development of targeted and innovative control strategies for stored-product pests.

Scientific DataVol. 12(1)
Henan University of Technology (CN), Tobacco Research Institute (CN)
Henan University of Technology, Henan University
Zero hunger
Openalex Percentile: Top 88%
Insect Resistance and Genetics
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