Bridging data silos to holistically model plant macrophenology

Phenological response to global climate change can impact ecosystem functions. There are various data sources from which spatiotemporal and taxonomic phenological data may be obtained: mobilized herbaria, community science initiatives, observatory networks, and remote sensing. However, analyses conducted to date have generally relied on single sources of these data. Siloed treatment of data in analyses may be due to the lack of harmonization across different data sources that offer partially nonoverlapping information and are often complementary. Such treatment precludes a deeper understanding of phenological responses at varying macroecological scales. Here, we describe a detailed vision for the harmonization of phenological data, including the direct integration of disparate sources of phenological data using a common schema. Specifically, we highlight existing methods for data harmonization that can be applied to phenological data: data design patterns, metadata standards, and ontologies. We describe how harmonized data from multiple sources can be integrated into analyses using existing methods and discuss the use of automated extraction techniques. Data harmonization is not a new concept in ecology, but the harmonization of phenological data is overdue. We aim to highlight the need for better data harmonization, providing a roadmap for how harmonized phenological data may fill gaps while simultaneously being integrated into analyses.

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Publication Details

Journal
New Phytologist
Published
2025-06-06
DOI
https://doi.org/10.1111/nph.70249
Citations
1
Primary Topic
Species Distribution and Climate Change
Type
article
Field-Weighted Citation Impact
1.84

Funders

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article

Bridging data silos to holistically model plant macrophenology

C.A. Smith, Margaret O’Brien, Eric R. Sokol, Aaron M. Ellison et al.
1 citations
New Phytologist
Species Distribution and Climate Change
1.84
article

Bridging data silos to holistically model plant macrophenology

C.A. Smith, Margaret O’Brien, Eric R. Sokol, Aaron M. Ellison, Tadeo Ramírez-Parada, Sydne Record, Charles C. Davis, Isaac Park, Susan J. Mazer, Lizbeth G. Amador
article en
1 citations

Abstract

Phenological response to global climate change can impact ecosystem functions. There are various data sources from which spatiotemporal and taxonomic phenological data may be obtained: mobilized herbaria, community science initiatives, observatory networks, and remote sensing. However, analyses conducted to date have generally relied on single sources of these data. Siloed treatment of data in analyses may be due to the lack of harmonization across different data sources that offer partially nonoverlapping information and are often complementary. Such treatment precludes a deeper understanding of phenological responses at varying macroecological scales. Here, we describe a detailed vision for the harmonization of phenological data, including the direct integration of disparate sources of phenological data using a common schema. Specifically, we highlight existing methods for data harmonization that can be applied to phenological data: data design patterns, metadata standards, and ontologies. We describe how harmonized data from multiple sources can be integrated into analyses using existing methods and discuss the use of automated extraction techniques. Data harmonization is not a new concept in ecology, but the harmonization of phenological data is overdue. We aim to highlight the need for better data harmonization, providing a roadmap for how harmonized phenological data may fill gaps while simultaneously being integrated into analyses.

New Phytologist
University of Wisconsin–Madison (US), Harvard University (US), University of California, Santa Barbara (US), National Ecological Observatory Network (US), Georgia Southern University (US), Skyre (United States) (US), University of Maine (US)
National Science Foundation, U.S. Department of Agriculture, Battelle, Maine Agricultural and Forest Experiment Station, National Institute of Food and Agriculture, Division of Biological Infrastructure
Climate action
Openalex Percentile: Top 15%
Species Distribution and Climate Change
1.84
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