Ballistic diffusion fronts in biomolecular condensates

Biomolecular condensates in cells compartmentalize vital processes by enriching molecules through molecular recognition. However, it remains elusive how transport occurs in biomolecular condensates and how it relates to their dynamic and/or viscoelastic state. We show that the transport of molecules in DNA model condensates does not follow classical Fickian diffusion, which has a blurry front with a square root of time dependence. By contrast, we identify a new type of transport with an ultrasharp front that propagates linearly with time. Our data reveal that this ultrasharp ballistic diffusion front originates from molecular recognition and an arrested-to-dynamic transition in the condensate properties. This diffusion mechanism is the result of intertwining chemical kinetics and condensate dynamics on transport in biomolecular condensates. We believe that our understanding will help to better explain and tune the dynamics and properties in synthetic condensate systems and for biological functions.

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Publication Details

Journal
Nature Nanotechnology
Published
2025-06-06
DOI
https://doi.org/10.1038/s41565-025-01941-0
Citations
17
Primary Topic
RNA Research and Splicing
Type
article
Field-Weighted Citation Impact
13.70

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article

Ballistic diffusion fronts in biomolecular condensates

Mischa Bonn, Brigitta Dúzs, Pablo G. Argudo, Andreas Walther et al.
17 citations
Nature Nanotechnology
RNA Research and Splicing
13.70
article

Ballistic diffusion fronts in biomolecular condensates

Mischa Bonn, Brigitta Dúzs, Pablo G. Argudo, Andreas Walther, Avik Samanta, Sapun H. Parekh, Wei Liu, Weixiang Chen, Sebastian V. Bauer
article en
17 citations

Abstract

Biomolecular condensates in cells compartmentalize vital processes by enriching molecules through molecular recognition. However, it remains elusive how transport occurs in biomolecular condensates and how it relates to their dynamic and/or viscoelastic state. We show that the transport of molecules in DNA model condensates does not follow classical Fickian diffusion, which has a blurry front with a square root of time dependence. By contrast, we identify a new type of transport with an ultrasharp front that propagates linearly with time. Our data reveal that this ultrasharp ballistic diffusion front originates from molecular recognition and an arrested-to-dynamic transition in the condensate properties. This diffusion mechanism is the result of intertwining chemical kinetics and condensate dynamics on transport in biomolecular condensates. We believe that our understanding will help to better explain and tune the dynamics and properties in synthetic condensate systems and for biological functions.

Nature NanotechnologyVol. 20(8)
Indian Institute of Technology Kharagpur (IN), University of Applied Sciences Mainz (DE), Johannes Gutenberg University Mainz (DE), Max Planck Institute for Polymer Research (DE), University of Córdoba (ES), Cordoba University (US), The University of Texas at Austin (US)
Alexander von Humboldt-Stiftung, Deutsche Forschungsgemeinschaft, China Scholarship Council
Openalex Percentile: Top 1%
RNA Research and Splicing
13.70
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