Detecting causality based on state space reconstruction from interspike intervals for neural spike trains

System analysis depends critically on the identification of the connections-especially the causal relationships-that exist between the components of the system. In particular, the causal relationships connecting neurons in brains, whose activities are typically observed as spike trains (a type of point process), need to be elucidated. Although various causality detection methods have been developed for time series signals, an effective causality detection method for spike trains has not been developed yet. To this end, we propose a causality detection method for spike trains based on the theory of nonlinear dynamical systems. We use the mutual prediction accuracy of the interspike intervals of spike trains for causality detection. Furthermore, we test the prediction accuracy obtained by the proposed method using the method of surrogate data from nonlinear dynamical systems theory. Numerical experiments revealed that the proposed method provides accurate causality detection for a small number of neural spike trains generated by the mathematical model.

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Publication Details

Journal
Physical review. E
Published
2025-06-06
DOI
https://doi.org/10.1103/t2jb-vvx9
Primary Topic
Neural dynamics and brain function
Type
article
Field-Weighted Citation Impact
0.00

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article

Detecting causality based on state space reconstruction from interspike intervals for neural spike trains

Yutaka Shimada, Tohru Ikeguchi, Karl J. Friston
Physical review. E
Neural dynamics and brain function
article

Detecting causality based on state space reconstruction from interspike intervals for neural spike trains

Yutaka Shimada, Tohru Ikeguchi, Karl J. Friston
article en

Abstract

System analysis depends critically on the identification of the connections-especially the causal relationships-that exist between the components of the system. In particular, the causal relationships connecting neurons in brains, whose activities are typically observed as spike trains (a type of point process), need to be elucidated. Although various causality detection methods have been developed for time series signals, an effective causality detection method for spike trains has not been developed yet. To this end, we propose a causality detection method for spike trains based on the theory of nonlinear dynamical systems. We use the mutual prediction accuracy of the interspike intervals of spike trains for causality detection. Furthermore, we test the prediction accuracy obtained by the proposed method using the method of surrogate data from nonlinear dynamical systems theory. Numerical experiments revealed that the proposed method provides accurate causality detection for a small number of neural spike trains generated by the mathematical model.

Physical review. EVol. 112(1)
Tokyo University of Science (JP), Saitama University (JP)
Japan Society for the Promotion of Science
Sustainable cities and communities
Openalex Percentile: Top 88%
Neural dynamics and brain function
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