Pseudomonas lyxosi sp. nov., Pseudomonas arabinosi sp. nov. and Pseudomonas frigoris sp. nov., isolated from glaciers

Three Gram-stain-negative, rod-shaped, motile bacterial strains, each with a single polar flagellum, designated LB3P38<sup>T</sup>, LT1P18<sup>T</sup> and ZB1P45<sup>T</sup>, were isolated from glacier samples on the Tibetan Plateau, P.R. China. These strains grew at temperatures ranging from -2 to 32 °C (optimum 25-30 °C) and at pH values of 5.0-11.0 (optimum pH 7.0). The similarities of 16S rRNA gene sequences among these strains ranged from 99.67% to 99.93%. Phylogenetic analysis based on 16S rRNA gene sequences confirmed their affiliation with the genus <i>Pseudomonas</i>. Phylogenomic analysis positioned these strains in close relation to <i>Pseudomonas svalbardensis</i> PMCC 200367<sup>T</sup> and <i>Pseudomonas frederiksbergensis</i> LMG 19851<sup>T</sup>. Average nucleotide identity values and digital DNA-DNA hybridization values between these strains and other type strains of the genus <i>Pseudomonas</i> were below 94.6% and 63.4%, respectively. The predominant fatty acids identified in these strains were C<sub>16:0</sub>, C<sub>17:0</sub> cyclo and summed feature 3 (C<sub>16:1</sub> <i>ω7</i>c and/or C<sub>16:1</sub> <i>ω6</i>c). Based on the combined phenotypic and phylogenetic evidence, each strain is proposed to represent a novel species within the genus <i>Pseudomonas</i>, with the names <i>Pseudomonas lyxosi</i> sp. nov. (type strain=LB3 P38<sup>T</sup>=CGMCC 1.11284<sup>T</sup>=JCM 37126<sup>T</sup>), <i>Pseudomonas arabinosi</i> sp. nov. (type strain=LT1 P18<sup>T</sup>=CGMCC 1.11310<sup>T</sup>=JCM 37131<sup>T</sup>) and <i>Pseudomonas frigoris</i> sp. nov. (type strain=ZB1 P45<sup>T</sup>=CGMCC 1.23235<sup>T</sup>=JCM 37141<sup>T</sup>) proposed.

Authors

Institutions

Publication Details

Journal
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2025-06-06
DOI
https://doi.org/10.1099/ijsem.0.006799
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Pseudomonas lyxosi sp. nov., Pseudomonas arabinosi sp. nov. and Pseudomonas frigoris sp. nov., isolated from glaciers

Yu‐Hua Xin, Chan Zhao, Qing Liu
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
article

Pseudomonas lyxosi sp. nov., Pseudomonas arabinosi sp. nov. and Pseudomonas frigoris sp. nov., isolated from glaciers

Yu‐Hua Xin, Chan Zhao, Qing Liu
article en

Abstract

Three Gram-stain-negative, rod-shaped, motile bacterial strains, each with a single polar flagellum, designated LB3P38<sup>T</sup>, LT1P18<sup>T</sup> and ZB1P45<sup>T</sup>, were isolated from glacier samples on the Tibetan Plateau, P.R. China. These strains grew at temperatures ranging from -2 to 32 °C (optimum 25-30 °C) and at pH values of 5.0-11.0 (optimum pH 7.0). The similarities of 16S rRNA gene sequences among these strains ranged from 99.67% to 99.93%. Phylogenetic analysis based on 16S rRNA gene sequences confirmed their affiliation with the genus <i>Pseudomonas</i>. Phylogenomic analysis positioned these strains in close relation to <i>Pseudomonas svalbardensis</i> PMCC 200367<sup>T</sup> and <i>Pseudomonas frederiksbergensis</i> LMG 19851<sup>T</sup>. Average nucleotide identity values and digital DNA-DNA hybridization values between these strains and other type strains of the genus <i>Pseudomonas</i> were below 94.6% and 63.4%, respectively. The predominant fatty acids identified in these strains were C<sub>16:0</sub>, C<sub>17:0</sub> cyclo and summed feature 3 (C<sub>16:1</sub> <i>ω7</i>c and/or C<sub>16:1</sub> <i>ω6</i>c). Based on the combined phenotypic and phylogenetic evidence, each strain is proposed to represent a novel species within the genus <i>Pseudomonas</i>, with the names <i>Pseudomonas lyxosi</i> sp. nov. (type strain=LB3 P38<sup>T</sup>=CGMCC 1.11284<sup>T</sup>=JCM 37126<sup>T</sup>), <i>Pseudomonas arabinosi</i> sp. nov. (type strain=LT1 P18<sup>T</sup>=CGMCC 1.11310<sup>T</sup>=JCM 37131<sup>T</sup>) and <i>Pseudomonas frigoris</i> sp. nov. (type strain=ZB1 P45<sup>T</sup>=CGMCC 1.23235<sup>T</sup>=JCM 37141<sup>T</sup>) proposed.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 75(6)
Chinese Academy of Sciences (CN), Institute of Microbiology (CN), China Agricultural University (CN)
National Natural Science Foundation of China
Life below water
Openalex Percentile: Top 88%
Genomics and Phylogenetic Studies
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.