Foundation versus domain-specific models for left ventricular segmentation on cardiac ultrasound

The Segment Anything Model (SAM) was fine-tuned on the EchoNet-Dynamic dataset and evaluated on external transthoracic echocardiography (TTE) and Point-of-Care Ultrasound (POCUS) datasets from CAMUS (University Hospital of St Etienne) and Mayo Clinic (99 patients: 58 TTE, 41 POCUS). Fine-tuned SAM was superior or comparable to MedSAM. The fine-tuned SAM also outperformed EchoNet and U-Net models, demonstrating strong generalization, especially on apical 2-chamber (A2C) images (fine-tuned SAM vs. EchoNet: CAMUS-A2C: DSC 0.891 ± 0.040 vs. 0.752 ± 0.196, p < 0.0001) and POCUS (DSC 0.857 ± 0.047 vs. 0.667 ± 0.279, p < 0.0001). Additionally, SAM-enhanced workflow reduced annotation time by 50% (11.6 ± 4.5 sec vs. 5.7 ± 1.7 sec, p < 0.0001) while maintaining segmentation quality. We demonstrated an effective strategy for fine-tuning a vision foundation model for enhancing clinical workflow efficiency and supporting human-AI collaboration.

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Publication Details

Journal
npj Digital Medicine
Published
2025-06-06
DOI
https://doi.org/10.1038/s41746-025-01730-y
Citations
2
Primary Topic
Cardiovascular Function and Risk Factors
Type
article
Field-Weighted Citation Impact
2.78
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article

Foundation versus domain-specific models for left ventricular segmentation on cardiac ultrasound

Garvan C. Kane, Imon Banerjee, Chieh‐Ju Chao, Justin Z. Wu et al.
2 citations
npj Digital Medicine
Cardiovascular Function and Risk Factors
2.78
article

Foundation versus domain-specific models for left ventricular segmentation on cardiac ultrasound

Garvan C. Kane, Imon Banerjee, Chieh‐Ju Chao, Justin Z. Wu, Reza Arsanjani, Juan Farina, Tiange Xiang, Wasan Kumar, Jae K. Oh, Curtis P. Langlotz, Li Fei-Fei, Yunqi Gu, Ehsan Adeli, Joseph Jeong, Lalith Appari, Rachael Wraith
article en
2 citations

Abstract

The Segment Anything Model (SAM) was fine-tuned on the EchoNet-Dynamic dataset and evaluated on external transthoracic echocardiography (TTE) and Point-of-Care Ultrasound (POCUS) datasets from CAMUS (University Hospital of St Etienne) and Mayo Clinic (99 patients: 58 TTE, 41 POCUS). Fine-tuned SAM was superior or comparable to MedSAM. The fine-tuned SAM also outperformed EchoNet and U-Net models, demonstrating strong generalization, especially on apical 2-chamber (A2C) images (fine-tuned SAM vs. EchoNet: CAMUS-A2C: DSC 0.891 ± 0.040 vs. 0.752 ± 0.196, p < 0.0001) and POCUS (DSC 0.857 ± 0.047 vs. 0.667 ± 0.279, p < 0.0001). Additionally, SAM-enhanced workflow reduced annotation time by 50% (11.6 ± 4.5 sec vs. 5.7 ± 1.7 sec, p < 0.0001) while maintaining segmentation quality. We demonstrated an effective strategy for fine-tuning a vision foundation model for enhancing clinical workflow efficiency and supporting human-AI collaboration.

npj Digital MedicineVol. 8(1)
Mayo Clinic (US), Mayo Clinic in Arizona (US), Arizona State University (US), Stanford University (US)
Openalex Percentile: Top 9%
Cardiovascular Function and Risk Factors
2.78
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Foundation versus domain-specific models for left ventricular segmentation on cardiac ultrasound — Garvan C. Kane, Imon Banerjee, et al. · npj Digital Medicine (2025) | TGRS Research Map | TGRS