The impact of model assumptions in interpreting cell kinetic studies

Stable isotope labelling is one of the best methods currently available for quantifying cell dynamics in vivo, particularly in humans where the absence of toxicity makes it preferable over other techniques such as CFSE or BrdU. Interpretation of stable isotope labelling data (as for BrdU and CFSE) necessitates simplifying assumptions. Here we investigate the impact of three of the most commonly used simplifying assumptions: (i) that the cell population of interest is closed, (ii) that the population of interest is kinetically homogeneous, and (iii) that the population is spatially homogeneous and suggest pragmatic ways in which the resulting errors can be reduced.

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Journal
PLoS Computational Biology
Published
2025-06-03
DOI
https://doi.org/10.1371/journal.pcbi.1012704
Primary Topic
Molecular Biology Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

The impact of model assumptions in interpreting cell kinetic studies

Derek C. Macallan, Ada W. C. Yan, Becca Asquith, Jonas Mackerodt et al.
PLoS Computational Biology
Molecular Biology Techniques and Applications
article

The impact of model assumptions in interpreting cell kinetic studies

Derek C. Macallan, Ada W. C. Yan, Becca Asquith, Jonas Mackerodt, Robert Busch, Ildar Sadreev, Yan Zhang
article en

Abstract

Stable isotope labelling is one of the best methods currently available for quantifying cell dynamics in vivo, particularly in humans where the absence of toxicity makes it preferable over other techniques such as CFSE or BrdU. Interpretation of stable isotope labelling data (as for BrdU and CFSE) necessitates simplifying assumptions. Here we investigate the impact of three of the most commonly used simplifying assumptions: (i) that the cell population of interest is closed, (ii) that the population of interest is kinetically homogeneous, and (iii) that the population is spatially homogeneous and suggest pragmatic ways in which the resulting errors can be reduced.

PLoS Computational BiologyVol. 21(6)
St George's, University of London (GB), Imperial College London (GB), University of Roehampton (GB)
Leukemia and Lymphoma Research, Wellcome Trust, Imperial College London, Medical Research Council, H2020 European Research Council, FP7 Ideas: European Research Council
Openalex Percentile: Top 89%
Molecular Biology Techniques and Applications
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The impact of model assumptions in interpreting cell kinetic studies — Derek C. Macallan, Ada W. C. Yan, et al. · PLoS Computational Biology (2025) | TGRS Research Map | TGRS