Microcrystal Electron Diffraction-Guided Discovery of Fungal Metabolites
Nature remains a vast repository of complex and functional metabolites whose structural characterization continues to drive innovations in pharmaceuticals, agrochemicals, and materials science. The cryogenic electron microscopy (cryoEM) method, microcrystal electron diffraction (microED, a 3D ED technique), has emerged as a powerful tool to structurally characterize small molecules. Despite this emerging role in structural chemistry, the cost and throughput of microED have limited its application in the discovery of natural products (NPs). While recent advances in sample preparation (e.g., arrayED) have provided a conceptual framework to address these challenges, they have remained unproven. Herein, we report the arrayED-driven discovery of a structurally unprecedented family of NPs (zopalides A-E), a muurolane-type sesquiterpene glycoside (rhytidoside A), aspergillicin analogs (aspergillicins H and I), and four crystal structures of previously reported fungal metabolites. Lastly, this the first time that the absolute stereo configuration of newly discovered NPs has been determined directly by microED alone without other methods using a small amount of sample.
Authors
- Gerald F. Bills (ORCID: https://orcid.org/0000-0003-2352-8417)
- Hosea M. Nelson (ORCID: https://orcid.org/0000-0002-4666-2793)
- Benjamin P. Tu (ORCID: https://orcid.org/0000-0001-5545-9183)
- Isabel Hernandez Rodriguez
- Yalong Zhang (ORCID: https://orcid.org/0000-0002-9995-7659)
- Jessica E. Burch (ORCID: https://orcid.org/0000-0002-3578-1770)
- Kunal Kumar Jha (ORCID: https://orcid.org/0000-0001-9551-8256)
- David A. Delgadillo (ORCID: https://orcid.org/0000-0002-0897-4470)
- Lygia S. de Moraes (ORCID: https://orcid.org/0000-0001-9176-8725)
- Yi Tang (ORCID: https://orcid.org/0000-0003-1597-0141)
- Lin Wu (ORCID: https://orcid.org/0000-0001-7169-3519)
- Caroline Wang (ORCID: https://orcid.org/0000-0002-9751-2904)
- Melody J. Tang
Institutions
- California Institute of Technology (US)
- University of California, Los Angeles (US)
- Division of Chemistry (US)
- Brown Foundation (US)
- Southwestern Medical Center (US)
- The University of Texas Southwestern Medical Center (US)
- The University of Texas Health Science Center at Houston (US)
Publication Details
- Journal
- Journal of the American Chemical Society
- Published
- 2025-06-03
- DOI
- https://doi.org/10.1021/jacs.5c01466
- Citations
- 4
- Primary Topic
- Microbial Natural Products and Biosynthesis
- Type
- article
- Field-Weighted Citation Impact
- 5.58
Funders
- David and Lucile Packard Foundation
- Howard Hughes Medical Institute
- Pew Charitable Trusts
- National Center for Complementary and Integrative Health