Long-Term Film Mulching with Manure Amendment Drives Trade-Offs Between Spring Maize Nutrient Uptake and Topsoil Carbon Stability on the Loess Plateau

Film mulching and gravel mulching are effective methods for increasing crop yields in Northwest China but exacerbate soil organic carbon (SOC) mineralisation. Manure amendment is a viable method for offsetting carbon (C) losses from mulching. SOC stability is a key factor in determining the nutrient supply capacity of soils, as it affects the C sources available to microorganisms. However, the synergistic effects of film mulching and manure amendment on SOC stability and crop nutrient uptake are still unclear. Therefore, four treatments—no mulching (CK), gravel mulching (GM), film mulching (FM), and film mulching with manure amendment (FCM)—were established on the Loess Plateau. Experiments were conducted to measure plant and grain nitrogen (N), phosphorus (P), potassium (K) uptake, SOC, labile organic C fractions (LOCFs), stability-based organic C fractions (SOCFs), and the C management index (CMI) in 2019 and 2020. The results showed that the FM and FCM treatments significantly improved crop dry matter accumulation in both years compared to the control. The FCM treatment significantly increased the two-year NPK averages of plants to 44.9%, 50.7%, and 54.5% and significantly increased those of grains to 46.7%, 58.2%, and 30.4%. The FCM treatment significantly increased all LOCFs, water solution C (WSC), hot-water-extractable C (HWC), permanganate oxidisable C (POXC), and particulate organic C (POC) in the topsoil (0–20 cm) in both years. The fractions of the active C pool (AP) in the SOCFs, namely, very labile C (CVL) and labile C (CL), were significantly increased, suggesting that the FCM treatment significantly decreased C stability in the topsoil. The sensitivity index showed that, among all SOC fractions, POC (21.5–72.9%) and less labile C (CLL) (20.8–483.8%) were the most sensitive fractions of LOCFs and SOCFs compared to SOC (1.93–35.8%). A random forest analysis showed that most labile C fractions and the CMI significantly contributed to crop N, P, and K uptake, especially POXC to crop N uptake, the CMI to crop P uptake, and the AP to crop K uptake. It was concluded that the FCM treatment synergistically enhanced SOC lability, crop NPK uptake, and labile C fractions, especially POXC, the AP, and the CMI, which serve as robust indicators for guiding precision nutrient management in semi-arid croplands.