Untargeted UHPLC-Q exactive orbitrap HRMS-based network pharmacology for the discovery of anti-breast cancer compounds from <i>spatholobus littoralis</i> stems fractions and experimental validation

<i>Spatholobus littoralis</i> has been traditionally used by the Dayak tribe as a medicine to treat breast cancer. However, its bioactive components and mechanisms of action remain unclear. To identify the bioactive compounds in the aqueous fraction of the 70% ethanol extract of <i>S. littoralis</i> stems and elucidate their mechanisms of action as an anti-breast cancer agent. The fractions of the 70% ethanol extract were tested for antioxidant activity and aqueous fraction was analysed for bioactive compounds by using UHPLC-Q-Orbitrap-HRMS, network pharmacology, molecular docking, and experimental validation. The protein-protein interaction (PPI) analysis identified 10 target genes related to breast cancer, with KEGG pathway analysis indicating activity in breast cancer. The molecular docking analysis showed binding affinities from -5.7 to -7.5 kcal/mol. The experimental validation using cytotoxicity testing resulted in an IC<sub>50</sub> value of 121.66 µg/mL. Several bioactive compounds from the aqueous fraction exhibited anti-breast cancer activity <i>via</i> EGFR tyrosine kinase inhibition.

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Journal
Natural Product Research
Published
2025-06-02
DOI
https://doi.org/10.1080/14786419.2025.2511158
Primary Topic
Synthesis and biological activity
Type
article
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article

Untargeted UHPLC-Q exactive orbitrap HRMS-based network pharmacology for the discovery of anti-breast cancer compounds from spatholobus littoralis stems fractions and experimental validation

Tedi Rustandi, Ahmed Mahal, Abdul Mahmud Yumassik, Ahmad J. Obaidullah et al.
Natural Product Research
Synthesis and biological activity
article

Untargeted UHPLC-Q exactive orbitrap HRMS-based network pharmacology for the discovery of anti-breast cancer compounds from spatholobus littoralis stems fractions and experimental validation

Tedi Rustandi, Ahmed Mahal, Abdul Mahmud Yumassik, Ahmad J. Obaidullah, Muhammad Yasir, Farida Hayati, Senya Puteri Amalia, Muhammad Hafizh Abiyyu Fathin Fawwazi, Muhammad Prasetyo Nugroho, Elza Julian Eka Putri Nugraha, Kamalia
article en

Abstract

<i>Spatholobus littoralis</i> has been traditionally used by the Dayak tribe as a medicine to treat breast cancer. However, its bioactive components and mechanisms of action remain unclear. To identify the bioactive compounds in the aqueous fraction of the 70% ethanol extract of <i>S. littoralis</i> stems and elucidate their mechanisms of action as an anti-breast cancer agent. The fractions of the 70% ethanol extract were tested for antioxidant activity and aqueous fraction was analysed for bioactive compounds by using UHPLC-Q-Orbitrap-HRMS, network pharmacology, molecular docking, and experimental validation. The protein-protein interaction (PPI) analysis identified 10 target genes related to breast cancer, with KEGG pathway analysis indicating activity in breast cancer. The molecular docking analysis showed binding affinities from -5.7 to -7.5 kcal/mol. The experimental validation using cytotoxicity testing resulted in an IC<sub>50</sub> value of 121.66 µg/mL. Several bioactive compounds from the aqueous fraction exhibited anti-breast cancer activity <i>via</i> EGFR tyrosine kinase inhibition.

Natural Product Research
Cihan University-Erbil (IQ), King Saud University (SA), Islamic University of Indonesia (ID), Universitas Achmad Yani (ID)
Openalex Percentile: Top 91%
Synthesis and biological activity
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