Competition Between Intermolecular Interactions in the Self-Assembly of Cocrystals of Polyfluorinated Arylenediamines with Crown Ethers: Effect of the Cyano Group
2,4-Diamino-3,5,6-trifluorobenzonitrile makes cocrystals with macrocyclic 18-crown-6, 15-crown-5, and 12-crown-4 ethers of 4:3, 1:1, and 2:1 stoichiometries respectively. The inability to 1:1 cocrystallization with 18-crown-6 and a nonmonotonic change in the diamine fraction in the cocrystal when the macrocycle size changes distinguish it from a series of structurally similar polyfluoroarylenediamines. In all cocrystals synthesized the cyano group and the polyfluoroaromatic moiety participate in structure-forming interactions (N–H⋯Ncyano H-bond, π⋯π and p⋯π contacts) supplementing the N–H⋯Ocr H-bond with crown ether. Quantum chemical DFT computations of the molecular electrostatic potential, binding energies, and topological parameters of the electron density in dimers show a considerable contribution of interactions between aromatic coformer molecules to stabilization of the cocrystal structure. The key factor providing the 1:1 cocrystallization is π-stacking occurring in the cocrystal with 15-crown-5 and is violated when passing to 18-crown-6 due to an increase in the macrocycle size. The structural and quantum chemical analysis performed characterizes the hierarchy of supramolecular synthons as tools to design molecular crystals.
Authors
- N. A. Kryuchkova
- Yu. V. Gatilov (ORCID: https://orcid.org/0000-0002-4128-7293)
- Evgenij V. Malykhin (ORCID: https://orcid.org/0000-0003-0793-9689)
- Denis P. Pishchur (ORCID: https://orcid.org/0000-0002-0532-6478)
- Tamara A. Vaganova (ORCID: https://orcid.org/0000-0002-9076-8720)
Institutions
- Novosibirsk Institute of Organic Chemistry (RU)
- Nikolaev Institute of Inorganic Chemistry (RU)
Publication Details
- Journal
- Journal of Structural Chemistry
- Published
- 2025-05-01
- DOI
- https://doi.org/10.1134/s0022476625050154
- Primary Topic
- Crystallography and molecular interactions
- Type
- article
- Field-Weighted Citation Impact
- 0.00