Universal multilayer network embedding reveals a causal link between GABA neurotransmitter and cancer
The development of MultiXVERSE represents a significant advancement in the integration and analysis of multilayer networks for biological research. By providing a universal, scalable framework for multilayer network embedding, MultiXVERSE enables the systematic exploration of molecular and phenotypic interactions across diverse biological contexts. Our experimental validation of the predicted link between GABA and cancer using Xenopus laevis underscores its capability to generate biologically meaningful hypotheses and accelerate breakthroughs in multi-omics research. Future directions include applying MultiXVERSE to additional multi-omics datasets and integrating it with high-throughput experimental pipelines for systematic hypothesis generation and validation, particularly in drug discovery. Beyond its biological applications, MultiXVERSE is a versatile tool that can be utilized for analyzing multilayer networks in a wide range of fields, including social sciences and other complex systems. By offering a universal framework, MultiXVERSE paves the way for novel insights and interdisciplinary collaborations in multilayer network research.
Authors
- Michael Levin (ORCID: https://orcid.org/0000-0003-2439-7981)
- Léo Pio‐Lopez (ORCID: https://orcid.org/0000-0001-8081-1070)
Institutions
- Tufts University (US)
Publication Details
- Journal
- BMC Bioinformatics
- Published
- 2025-06-02
- DOI
- https://doi.org/10.1186/s12859-025-06158-5
- Citations
- 2
- Primary Topic
- Bioinformatics and Genomic Networks
- Type
- article
- Field-Weighted Citation Impact
- 1.61