Rise of Ketone α-Hydrolysis: Revisiting S<sub>N</sub>Acyl, E1cB Mechanisms and Carbon-Based Leaving Groups in One Reaction for Drug-Targeting Applications
Nucleophilic substitution of carbon-leaving groups (CLGs) and base-catalyzed alcohol dehydration reactions are rare in the organic chemistry literature. Herein, we introduce an unprecedented example of a novel reaction that challenges the poor leaving group abilities of both CLGs and hydroxide ions via a concerted transition state, demonstrating E1cB<sub>anion</sub> step-2/S<sub>N</sub>Acyl step-1 reaction mechanism interference, displayed by <b>S1</b> and <b>S2</b> scaffolds in an alkaline medium (Schemes 5,8). The work offers swift access to C-C bond hydrolysis in the form of ketone α-hydrolytic cleavage under environmentally convenient conditions. Three reaction products were characterized by single-crystal X-ray crystallography, which supported their computed most stable ring conformer structures. Experimental and DFT evidence evoke fast reaction rates (<b>TS1'</b>, Δ<i>G</i><sup>‡</sup> = 26.8 kcal/mol, Scheme 5 and <b>TS5b</b>, Δ<i>G</i><sup>‡</sup> = 14.9 kcal/mol, Scheme 8). Given the synthetic tunability and the reported anticancer activity of <b>S2</b> (via CDK2 inhibition), we introduce application inspirations, utilizing prodrug strategy, to load a biotargeting molecule on <b>S2</b> and employ the newly discovered reaction in the bioactivation mechanism. Furthermore, the <b>S1</b> scaffold offers two covalent derivatization sites that would allow for the sequential biorelease of a C2-linked biotargeting molecule and then a C4-linked drug, in a <b>TS1'</b>-like rate-limiting step, within the designed glutathione-induced prodrug bioactivation mechanism (Scheme 9).
Authors
- Omaima F. Ibrahim
- Shaaban K. Mohamed (ORCID: https://orcid.org/0000-0003-4265-5315)
- Islam S. Marae (ORCID: https://orcid.org/0000-0002-9290-0174)
- Etify A. Bakhite (ORCID: https://orcid.org/0000-0003-3994-5629)
- Walid Sharmoukh (ORCID: https://orcid.org/0000-0002-7952-1591)
- Raed M. Maklad (ORCID: https://orcid.org/0000-0002-5219-4842)
Institutions
- University of Technology Sydney (AU)
- Manchester Metropolitan University (GB)
- The University of Sydney (AU)
- Kafrelsheikh University (EG)
- Physical Sciences (United States) (US)
- National Research Centre (EG)
- Assiut University (EG)
Publication Details
- Journal
- The Journal of Organic Chemistry
- Published
- 2025-05-30
- DOI
- https://doi.org/10.1021/acs.joc.5c00161
- Citations
- 3
- Primary Topic
- Protein Structure and Dynamics
- Type
- article
- Field-Weighted Citation Impact
- 2.42
Funders
- Science and Technology Development Fund