Landscape and regulation of mRNA translation in the early C. elegans embryo

Animal embryos rely on regulated translation of maternally deposited mRNAs to drive early development. Using low-input ribosome profiling combined with RNA sequencing on precisely staged embryos, we measure mRNA translation during the first four cell cycles of C. elegans development. We uncover stage-specific patterns of developmentally coordinated translational regulation. Our results confirm that mRNA localization correlates with translational efficiency, though initial translational repression in germline precursors occurs before P-granule association. Our analysis suggests that the RNA-binding protein OMA-1 represses the translation of its target mRNAs in a stage-specific manner while indirectly promoting the translational efficiency of other transcripts. These findings illuminate how post-transcriptional mechanisms shape the embryonic proteome to direct cell differentiation, with implications for understanding similar regulation across species where maternal factors guide early development.

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Publication Details

Journal
Cell Reports
Published
2025-05-30
DOI
https://doi.org/10.1016/j.celrep.2025.115778
Citations
4
Primary Topic
RNA Research and Splicing
Type
article
Field-Weighted Citation Impact
3.22

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article

Landscape and regulation of mRNA translation in the early C. elegans embryo

Vighnesh Ghatpande, Daniel J. Dickinson, Chenxia Hu, Can Cenik et al.
4 citations
Cell Reports
RNA Research and Splicing
3.22
article

Landscape and regulation of mRNA translation in the early C. elegans embryo

Vighnesh Ghatpande, Daniel J. Dickinson, Chenxia Hu, Can Cenik, Y. Shukla
article en
4 citations

Abstract

Animal embryos rely on regulated translation of maternally deposited mRNAs to drive early development. Using low-input ribosome profiling combined with RNA sequencing on precisely staged embryos, we measure mRNA translation during the first four cell cycles of C. elegans development. We uncover stage-specific patterns of developmentally coordinated translational regulation. Our results confirm that mRNA localization correlates with translational efficiency, though initial translational repression in germline precursors occurs before P-granule association. Our analysis suggests that the RNA-binding protein OMA-1 represses the translation of its target mRNAs in a stage-specific manner while indirectly promoting the translational efficiency of other transcripts. These findings illuminate how post-transcriptional mechanisms shape the embryonic proteome to direct cell differentiation, with implications for understanding similar regulation across species where maternal factors guide early development.

Cell ReportsVol. 44(6)
The University of Texas at Austin (US)
Welch Foundation, National Institutes of Health, National Institute of General Medical Sciences, National Institute of Child Health and Human Development
Openalex Percentile: Top 8%
RNA Research and Splicing
3.22
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