Regulation of WDFY1 Expression by miRNAs, Transcription Factors, and IL-6 in Murine Mesangial Cells

WD40 repeat and FYVE containing protein 1 (WDFY1) functions in membrane trafficking and protein complex scaffolding. WDFY1 has been studied in the immune system and in different oncogenic conditions. Therefore, comprehensive understanding of WDFY1 regulation mechanisms is much desired. In this study, we analyzed the promoter and 5'- and 3'-untranslated regions (UTRs) of <i>wdfy1</i> and identified critical sequence elements, transcription factors (TFs), and miRNAs that collaboratively regulate <i>wdfy1</i> gene expression. A 3.5 kb segment of the mouse <i>wdfy1</i> promoter and 5'-UTR was cloned into a luciferase expression vector and transfected into HeLa cells. Luciferase assays of promoter deletion mutants revealed approximately four-fold increased activity attributed by a 500 bp distal fragment upstream of the <i>wdfy1</i> 5'-UTR. Four TFs (Sp1, Ap-1, Hes1, and TCF7) were found to be critical for <i>wdfy1</i> expression with binding sites spread throughout the promoter and 5'-UTR regions. Cloning of a 3.2 kb fragment of <i>wdfy1</i> 3'-UTR into the luciferase expression vector led to an ~3.5-fold decrease in luciferase activity. Complementary siRNA and luciferase assays mutually confirmed our findings. Most importantly, IL-6, a critical cytokine in organ inflammation, was found to promote WDFY1 expression through the upregulation of Sp1 in primary renal mesangial cells. We, therefore, identified a potential inflammation-driven WDFY1 upregulation in mice.

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Journal
Cells
Published
2025-05-29
DOI
https://doi.org/10.3390/cells14110798
Primary Topic
RNA modifications and cancer
Type
article
Field-Weighted Citation Impact
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article

Regulation of WDFY1 Expression by miRNAs, Transcription Factors, and IL-6 in Murine Mesangial Cells

Yuxuan Zhen, Wen-Hai Shao, Jane Yu, Xiaoyang Qi et al.
Cells
RNA modifications and cancer
article

Regulation of WDFY1 Expression by miRNAs, Transcription Factors, and IL-6 in Murine Mesangial Cells

Yuxuan Zhen, Wen-Hai Shao, Jane Yu, Xiaoyang Qi, Ahmet Kaynak, Siru Li, David E. Adams
article en

Abstract

WD40 repeat and FYVE containing protein 1 (WDFY1) functions in membrane trafficking and protein complex scaffolding. WDFY1 has been studied in the immune system and in different oncogenic conditions. Therefore, comprehensive understanding of WDFY1 regulation mechanisms is much desired. In this study, we analyzed the promoter and 5'- and 3'-untranslated regions (UTRs) of <i>wdfy1</i> and identified critical sequence elements, transcription factors (TFs), and miRNAs that collaboratively regulate <i>wdfy1</i> gene expression. A 3.5 kb segment of the mouse <i>wdfy1</i> promoter and 5'-UTR was cloned into a luciferase expression vector and transfected into HeLa cells. Luciferase assays of promoter deletion mutants revealed approximately four-fold increased activity attributed by a 500 bp distal fragment upstream of the <i>wdfy1</i> 5'-UTR. Four TFs (Sp1, Ap-1, Hes1, and TCF7) were found to be critical for <i>wdfy1</i> expression with binding sites spread throughout the promoter and 5'-UTR regions. Cloning of a 3.2 kb fragment of <i>wdfy1</i> 3'-UTR into the luciferase expression vector led to an ~3.5-fold decrease in luciferase activity. Complementary siRNA and luciferase assays mutually confirmed our findings. Most importantly, IL-6, a critical cytokine in organ inflammation, was found to promote WDFY1 expression through the upregulation of Sp1 in primary renal mesangial cells. We, therefore, identified a potential inflammation-driven WDFY1 upregulation in mice.

CellsVol. 14(11)
Cincinnati Children's Hospital Medical Center (US), University of Cincinnati (US), University of Cincinnati Medical Center (US)
Pancreatic Cancer Action Network, University of Cincinnati, National Institutes of Health
Openalex Percentile: Top 89%
RNA modifications and cancer
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