Transcriptome profiling identifies tissue-specific genes regulating sugarmetabolism in Actinidia valvata Dunn

Actinidia valvata Dunn is a fruit tree that originated in China and is well recognized for its nutrient, health, and medicinal value.With the aim of identifying the nutrients involved, this study conducted a comprehensive transcriptome analysis of the stem, leaf, and fruit of A. valvata using the Illumina HiSeq platform.RNA-Seq analysis produced 39.03 GB of clean data and further identified a total of 50,928 unigenes with an average length of 1,236.40bp.Functional annotation of these unigenes was carried out by comparing them with several databases.This resulted in the incorporation of annotated information regarding 32,202 unigenes, which constituted 63.23% of the total.Moreover, 11,809 unigenes participated in 129 unique metabolic pathways.Comparative analysis of gene expression across various tissues led to the identification of differentially expressed genes (DEGs).Among these, 26 DEGs were closely associated with sugar metabolism pathways.Moreover, correlation analysis between total sugar content and expression of the DEGs implied in sugar metabolism proved that the identified key genes SUS, INV, SPS, HK, malZ, and GPI have strong functions in sugar metabolism in A. valvata.Our findings reveal that sucrose synthase (SUS) and invertase (INV) are critical drivers of sugar accumulation in fruits, providing targets for breeding sweeter kiwifruit varieties.

Publication Details

Journal
Asian Journal of Agriculture and Biology
Published
2025-01-01
DOI
https://doi.org/10.35495/ajab.2025.035
Primary Topic
Plant nutrient uptake and metabolism
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Transcriptome profiling identifies tissue-specific genes regulating sugarmetabolism in Actinidia valvata Dunn

Asian Journal of Agriculture and Biology
Plant nutrient uptake and metabolism
article

Transcriptome profiling identifies tissue-specific genes regulating sugarmetabolism in Actinidia valvata Dunn

article en

Abstract

Actinidia valvata Dunn is a fruit tree that originated in China and is well recognized for its nutrient, health, and medicinal value.With the aim of identifying the nutrients involved, this study conducted a comprehensive transcriptome analysis of the stem, leaf, and fruit of A. valvata using the Illumina HiSeq platform.RNA-Seq analysis produced 39.03 GB of clean data and further identified a total of 50,928 unigenes with an average length of 1,236.40bp.Functional annotation of these unigenes was carried out by comparing them with several databases.This resulted in the incorporation of annotated information regarding 32,202 unigenes, which constituted 63.23% of the total.Moreover, 11,809 unigenes participated in 129 unique metabolic pathways.Comparative analysis of gene expression across various tissues led to the identification of differentially expressed genes (DEGs).Among these, 26 DEGs were closely associated with sugar metabolism pathways.Moreover, correlation analysis between total sugar content and expression of the DEGs implied in sugar metabolism proved that the identified key genes SUS, INV, SPS, HK, malZ, and GPI have strong functions in sugar metabolism in A. valvata.Our findings reveal that sucrose synthase (SUS) and invertase (INV) are critical drivers of sugar accumulation in fruits, providing targets for breeding sweeter kiwifruit varieties.

Asian Journal of Agriculture and Biology
Liupanshui Normal University
Zero hunger
Openalex Percentile: Top 92%
Plant nutrient uptake and metabolism
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Transcriptome profiling identifies tissue-specific genes regulating sugarmetabolism in Actinidia valvata Dunn · Asian Journal of Agriculture and Biology (2025) | TGRS Research Map | TGRS