Concurrent mutations in DNA damage repair genes <i>BRCA1</i> , <i>POLE</i> , <i>ATM</i> and <i>FANCA</i> to predict overall and progression-free survival for patients (pts) with metastatic pancreatic ductal adenocarcinoma (mPDAC) treated with chemoth

4178 Background: CCTG PA.7 (NCT02879318) was a randomized phase II trial comparing gemcitabine (G) and nab-paclitaxel (N) with and without dual immune checkpoint inhibition with durvalumab (D) and tremelimumab (T) as 1st-line therapy in pts with mPDAC. Matched plasma and tissue-based sequencing was performed for exploratory correlative biomarker analysis. Methods: Pts received G+N+D+T (n = 11 run-in, 119 randomized, 2:1 randomization) or G+N (n = 61). Long-term trial analysis was performed with a median follow-up time of 81.6 months. Correlative analysis was performed for pts with baseline ctDNA sequencing using a 600-gene PredicineATLAS panel (n = 173), with a subset having matched archival tissue available for whole-genome sequencing (WGS; n = 46). Cox-based elastic net regression models were used to identify and rank combinations of mutations by their ability to predict survival hazard. Results: Long-term follow up analysis demonstrated no significant difference in median overall survival (mOS) between pts randomized to G+N+D+T vs G+N (9.8 vs 8.8 months; hazard ratio (HR) = 0.88; p = 0.46). Median progression-free survival (mPFS) was also not significantly different between treatment arms (5.5 vs 5.4 months, respectively; HR = 0.95, p = 0.77). Landmark analysis demonstrated 4-year survivorship of 5.4% in pts treated with G+N+D+T arm compared to 1.6% with G+N (p = 0.07). Two or more ctDNA-based mutations (somatic and germline considered separately) in DNA damage repair (DDR) genes BRCA1 , POLE , ATM or FANCA was present in 18/173 pts (10.4%) and was associated with improved OS with G+N+D+T vs G+N (mOS 26.2 months vs. 7.1 months; HR = 0.22 [0.07-0.7]; p = 0.0041, p-interaction = 0.012) as well as PFS (mPFS 14.6 vs. 4.6; HR = 0.17 [0.05-0.6]; p = 0.0020, p-interaction = 0.0070). In pts treated with G+N+D+T, partial response (PR) was seen in 63.6% of pts with ≥2 DDR gene mutations compared to 26.9% in other pts (p = 0.033), and this effect was not observed with G+N (p = 0.18). The DDR gene biomarker was validated in 5/6 (83%) biomarker-positive samples using archival tissue WGS. Conclusions: The presence of ≥2 DDR gene mutations was strongly associated with benefit from the combination of chemotherapy with dual immune checkpoint inhibitor therapy, and pts with this signature had prolonged mOS of over 2 years. This represents the first prospective study in PDAC to define a predictive biomarker beyond mismatch repair deficiency for benefit from immune checkpoint therapy. Given the long-term survival noted in this subgroup, assessment of DDR gene mutations could be considered as part of routine standard of care testing for mPDAC pts. Clinical trial information: NCT02879318 .

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Journal
Journal of Clinical Oncology
Published
2025-05-28
DOI
https://doi.org/10.1200/jco.2025.43.16_suppl.4178
Primary Topic
Pancreatic and Hepatic Oncology Research
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article
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article

Concurrent mutations in DNA damage repair genes BRCA1 , POLE , ATM and FANCA to predict overall and progression-free survival for patients (pts) with metastatic pancreatic ductal adenocarcinoma (mPDAC) treated with chemoth

Daniel J. Renouf, Petr Kavan, Patricia A. Tang, Stephen Welch et al.
Journal of Clinical Oncology
Pancreatic and Hepatic Oncology Research
article

Concurrent mutations in DNA damage repair genes BRCA1 , POLE , ATM and FANCA to predict overall and progression-free survival for patients (pts) with metastatic pancreatic ductal adenocarcinoma (mPDAC) treated with chemoth

Daniel J. Renouf, Petr Kavan, Patricia A. Tang, Stephen Welch, Frédéric Lemay, Félix Couture, Dongsheng Tu, Derek J. Jonker, Jonathan M. Loree, Jennifer J. Knox, Sharlene Gill, Mustapha Tehfé, Nathalie Aucoin, Shidong Jia, James T. Topham, Pan Du, Yoo‐Joung Ko, David F. Schaeffer, Christopher James O'Callaghan, Mohammed Harb
article en

Abstract

4178 Background: CCTG PA.7 (NCT02879318) was a randomized phase II trial comparing gemcitabine (G) and nab-paclitaxel (N) with and without dual immune checkpoint inhibition with durvalumab (D) and tremelimumab (T) as 1st-line therapy in pts with mPDAC. Matched plasma and tissue-based sequencing was performed for exploratory correlative biomarker analysis. Methods: Pts received G+N+D+T (n = 11 run-in, 119 randomized, 2:1 randomization) or G+N (n = 61). Long-term trial analysis was performed with a median follow-up time of 81.6 months. Correlative analysis was performed for pts with baseline ctDNA sequencing using a 600-gene PredicineATLAS panel (n = 173), with a subset having matched archival tissue available for whole-genome sequencing (WGS; n = 46). Cox-based elastic net regression models were used to identify and rank combinations of mutations by their ability to predict survival hazard. Results: Long-term follow up analysis demonstrated no significant difference in median overall survival (mOS) between pts randomized to G+N+D+T vs G+N (9.8 vs 8.8 months; hazard ratio (HR) = 0.88; p = 0.46). Median progression-free survival (mPFS) was also not significantly different between treatment arms (5.5 vs 5.4 months, respectively; HR = 0.95, p = 0.77). Landmark analysis demonstrated 4-year survivorship of 5.4% in pts treated with G+N+D+T arm compared to 1.6% with G+N (p = 0.07). Two or more ctDNA-based mutations (somatic and germline considered separately) in DNA damage repair (DDR) genes BRCA1 , POLE , ATM or FANCA was present in 18/173 pts (10.4%) and was associated with improved OS with G+N+D+T vs G+N (mOS 26.2 months vs. 7.1 months; HR = 0.22 [0.07-0.7]; p = 0.0041, p-interaction = 0.012) as well as PFS (mPFS 14.6 vs. 4.6; HR = 0.17 [0.05-0.6]; p = 0.0020, p-interaction = 0.0070). In pts treated with G+N+D+T, partial response (PR) was seen in 63.6% of pts with ≥2 DDR gene mutations compared to 26.9% in other pts (p = 0.033), and this effect was not observed with G+N (p = 0.18). The DDR gene biomarker was validated in 5/6 (83%) biomarker-positive samples using archival tissue WGS. Conclusions: The presence of ≥2 DDR gene mutations was strongly associated with benefit from the combination of chemotherapy with dual immune checkpoint inhibitor therapy, and pts with this signature had prolonged mOS of over 2 years. This represents the first prospective study in PDAC to define a predictive biomarker beyond mismatch repair deficiency for benefit from immune checkpoint therapy. Given the long-term survival noted in this subgroup, assessment of DDR gene mutations could be considered as part of routine standard of care testing for mPDAC pts. Clinical trial information: NCT02879318 .

Journal of Clinical OncologyVol. 43(16_suppl)
St. Michael's Hospital (CA), University Health Network (CA), University of British Columbia (CA), University of Calgary (CA), University of Toronto (CA), Queen's University (CA), Moncton Hospital (CA), Ottawa Hospital (CA), London Health Sciences Centre (CA), Jewish General Hospital (CA), Centre Hospitalier Universitaire de Sherbrooke (CA), Princess Margaret Cancer Centre (CA), Vancouver General Hospital (CA), Centre hospitalier universitaire de Québec (CA), Bausch Health (Canada) (CA), Centre Hospitalier de l’Université de Montréal (CA), Pancreas Centre (Canada) (CA), Unity Health Toronto
Openalex Percentile: Top 82%
Pancreatic and Hepatic Oncology Research
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