Characteristic genes and immune landscape of interstitial cystitis

We screened the feature genes, CCL18, MMP10 and WIF1, among the differentially expressed genes (DEGs) by three different machine learning algorithms. They showed good diagnostic performance in both training and testing cohorts and were potential diagnostic markers for IC. We paint the immune landscape of IC. In IC tissue, immune cell subtypes infiltrated extensively. Most immune cell subtypes were up-regulated in IC tissue, including mast cells, activated CD4 T cells, and regulatory T cells that suppress immune responses. MMP10 and CCL18 had positive correlation to ICI, while WIF was negatively correlated with ICI. MMP10 and CCL18 may be the driving factors of immune response or their expression levels may be increased by immune response. The effect of characteristic genes of IC on immune cell subtypes still needed to be further explored.

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Publication Details

Journal
PLoS ONE
Published
2025-05-28
DOI
https://doi.org/10.1371/journal.pone.0320249
Citations
3
Primary Topic
Bladder and Urothelial Cancer Treatments
Type
article
Field-Weighted Citation Impact
6.02
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article

Characteristic genes and immune landscape of interstitial cystitis

Yongzhang Li, Yan Zhou, Jianpeng Han, Young Ho Yun et al.
3 citations
PLoS ONE
Bladder and Urothelial Cancer Treatments
6.02
article

Characteristic genes and immune landscape of interstitial cystitis

Yongzhang Li, Yan Zhou, Jianpeng Han, Young Ho Yun, Wenbin Chen, Jianyong Feng, Jie Hu, Kuo Guo, Junhao Wang
article en
3 citations

Abstract

We screened the feature genes, CCL18, MMP10 and WIF1, among the differentially expressed genes (DEGs) by three different machine learning algorithms. They showed good diagnostic performance in both training and testing cohorts and were potential diagnostic markers for IC. We paint the immune landscape of IC. In IC tissue, immune cell subtypes infiltrated extensively. Most immune cell subtypes were up-regulated in IC tissue, including mast cells, activated CD4 T cells, and regulatory T cells that suppress immune responses. MMP10 and CCL18 had positive correlation to ICI, while WIF was negatively correlated with ICI. MMP10 and CCL18 may be the driving factors of immune response or their expression levels may be increased by immune response. The effect of characteristic genes of IC on immune cell subtypes still needed to be further explored.

PLoS ONEVol. 20(5)
Hospital of Hebei Province (CN), Langfang Normal University (CN)
Openalex Percentile: Top 4%
Bladder and Urothelial Cancer Treatments
6.02
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