Concordance of response-based clinical trial and machine learning–generated real-world end points.
e13625 Background: Real-world evidence (RWE) is increasingly used to complement clinical trial data in oncology, providing rapid insights to inform study design and drug development. Using deep learning, natural language processing (NLP)-based machine learning models, we developed a real-world response (rwR) approach.This study evaluates the concordance between clinical trial and real-world (rw) end points in patients with stage IV non–small cell lung cancer (NSCLC) treated with first-line platinum plus pemetrexed chemotherapy. Methods: This retrospective study compared response-based outcomes generated from patients included in the control arm of IMpower132 with a trial-aligned cohort of rw patients selected from the US-nationwide Flatiron Health electronic health record (EHR)-derived deidentified database. Rw patients were aligned to key trial inclusion/exclusion criteria and further adjusted using propensity score weighting on selected baseline characteristics including demographics (eg, age, race) and clinical factors (eg, Eastern Cooperative Oncology Group [ECOG] performance status, metastatic sites). rwR was generated using NLP-based machine learning models trained on expert human-abstracted data (training set N ~12 000 patients) to extract clinician-documented change in disease burden (ie, complete response, partial response, stable disease, progressive disease, unknown) at each imaging-based disease assessment timepoint. Trial response data were captured according to a RECIST-based trial protocol. End points included response rates (rwRR vs objective response rate [ORR]), duration of response (rwDOR vs DOR), and progression-free survival (rwPFS vs PFS). Concordance was evaluated using logistic regression for response rates and Cox regression for DOR and PFS. Results: The rw cohort (N = 494) was well aligned with the clinical trial cohort (N = 275) after weighting, with standardized mean differences below 0.1 across all selected baseline characteristics. The rwRR was 34%, compared with the 38% ORR observed in the trial cohort (OR, 0.83 [95% CI, 0.54-1.27]). The median rwDOR was 5.7 months (95% CI, 4.3-7.7), compared with 6.9 months (95% CI, 4.5-8.3) for DOR in the trial cohort (HR, 1.18 [95% CI, 0.86-1.62]). rwPFS was 5.5 months (95% CI, 4.5-7.1), closely aligned with the 5.4 months (95% CI, 4.3-5.7) observed in the trial cohort (HR, 0.96 [95% CI, 0.79-1.16]). Conclusions: NLP-based ML models enable scalable and reliable generation of response-based end points from EHRs. Concordance between trial and rw end points highlights the utility of ML-driven approaches to advance RWE in oncology, particularly when leveraging large-scale, clinically rich, and well-curated training datasets.
Authors
- Tori Williams
- Qianyi Zhang (ORCID: https://orcid.org/0000-0003-0973-0037)
- Aaron B. Cohen (ORCID: https://orcid.org/0000-0002-5598-9210)
- Yichen Lu (ORCID: https://orcid.org/0000-0002-9436-0079)
- Sophia L. Maund
- Minu K. Srivastava (ORCID: https://orcid.org/0009-0000-3827-9180)
- Auriane Blarre (ORCID: https://orcid.org/0000-0002-4920-3496)
- Konstantin Krismer (ORCID: https://orcid.org/0000-0001-8994-3416)
- Kelly Magee (ORCID: https://orcid.org/0000-0002-2511-4966)
- Aaron Dolor
- Qianyu Yuan (ORCID: https://orcid.org/0009-0001-4731-0263)
Institutions
- Flatiron Health (United States) (US)
Publication Details
- Journal
- Journal of Clinical Oncology
- Published
- 2025-05-28
- DOI
- https://doi.org/10.1200/jco.2025.43.16_suppl.e13625
- Primary Topic
- Meta-analysis and systematic reviews
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Flatiron Health