Circulating tumor DNA (ctDNA) dynamics in liver-limited metastatic colorectal cancer (mCRC) patients resected after first-line systemic treatment.
3544 Background: Liver-limited disease (LLD) occurs in 20-30% of metastatic colorectal cancer (mCRC) patients. Although 20-30% of patients who undergo resection can achieve a long-term overall survival benefit from liver surgery, most patients relapse during the first two years after hepatectomy. ctDNA is a promising tool in detecting the presence of minimal residual disease (MRD) after resection of colorectal liver metastases and a reliable prognostic tool for recurrence. ctDNA and its dynamics may also serve as a prognostic tool in patients candidate to liver resection following upfront chemotherapy. Methods: mCRC patients (N = 116) with initially unresectable LLD and R0/R1 resected after upfront chemotherapy were selected from 3 Italian academic centers. Blood samples were collected prospectively at baseline (T0), pre-surgery (TPrS) and post-surgery (TPoS). T0 samples were evaluable for 82 patients, TPrS for 116 and TPoS for 60. Biobanked plasma samples were analyzed with the Tempus xM MRD assay (xM), a tumor-naïve ctDNA MRD assay that integrates methylation and genomic variant classifiers to deliver a binary MRD call blinded to clinical outcomes. The methylation classifier detects fragments with CRC methylation signatures in differentially methylated regions trained by sequencing CRC and presumed-healthy samples on a 6 Mbp panel. The variant classifier detects highly prevalent CRC variants. Results: Methylation results were available for 60 TPoS patients with a clinical sensitivity of 56.4% and specificity of 100%. TPoS ctDNA status was associated with relapse-free survival (RFS) with the ctDNA- group experiencing longer median RFS (mRFS) than ctDNA+ (HR = 6.7, mRFS > 24 mos vs. 5.5 mos, p < 0.001). Patients who were persistently ctDNA- by methylation calls (n = 20) or converted to negative (n = 13) from TPrS to TPoS experienced longer RFS (mRFS 16.3 mos and > 24 mos respectively). Those who remained persistently ctDNA+ (n = 9) or converted to ctDNA+ (n = 12) had a mRFS of 5.3 and 5.9 mos respectively. Patients with variant allele fraction (VAF) reduction of ≥50% from T0 to TPrS (N = 53) experienced longer RFS than those who had < 50% reduction or increase in VAF (N = 18) (HR 2.21, mRFS 18.8 mos vs. 9.8 mos, p = 0.012). Lastly, patients that remained positive from T0 to TPrS (N = 23) experienced a numerically shorter RFS compared to those who converted to negative (N = 47) (median RFS 10.4 and 15.1 mos, HR 1.65, p = 0.10). Conclusions: xM demonstrates remarkable performance in predicting clinical recurrence and correlation to RFS at TPoS in LLD mCRC patients resected after upfront systemic therapy. Interestingly, patients with a VAF reduction ≥ 50% experience longer RFS following surgery, suggesting a potential role for this tool in multidisciplinary decision making in this setting.
Authors
- Chithra Sangli
- Veronica Conca (ORCID: https://orcid.org/0000-0001-7713-4005)
- Daniel Neems
- Christine Lo (ORCID: https://orcid.org/0000-0003-0969-9973)
- Riccardo Cerantola (ORCID: https://orcid.org/0000-0001-8004-3542)
- Robert Tell
- Filippo Ghelardi (ORCID: https://orcid.org/0009-0001-1820-4402)
- Roberto Moretto (ORCID: https://orcid.org/0000-0001-8456-9269)
- Guglielmo Vetere (ORCID: https://orcid.org/0000-0001-6943-2897)
- Farahnaz Islam (ORCID: https://orcid.org/0000-0002-8331-9871)
- Matteo Landi (ORCID: https://orcid.org/0000-0003-3789-5840)
- Michele Prisciandaro (ORCID: https://orcid.org/0000-0001-5596-469X)
- Halla Nimeiri (ORCID: https://orcid.org/0000-0002-8760-6456)
- Sabina Murgioni (ORCID: https://orcid.org/0000-0002-4682-9872)
- Kristiyana Kaneva
- Chiara Cremolini (ORCID: https://orcid.org/0000-0002-0520-4841)
- Ada Taravella (ORCID: https://orcid.org/0009-0000-2153-3867)
- Vittorio Studiale
- Seung Won Hyun (ORCID: https://orcid.org/0000-0002-9184-4780)
- Kate Sasser (ORCID: https://orcid.org/0009-0009-2804-1684)
Institutions
- University of Pisa (IT)
- University of Padua (IT)
- Istituto Oncologico Veneto (IT)
- Tempus Labs (United States) (US)
- Fondazione IRCCS Istituto Nazionale dei Tumori (IT)
- Azienda Ospedaliera Universitaria Pisana (IT)
Publication Details
- Journal
- Journal of Clinical Oncology
- Published
- 2025-05-28
- DOI
- https://doi.org/10.1200/jco.2025.43.16_suppl.3544
- Primary Topic
- Cancer Genomics and Diagnostics
- Type
- article
- Field-Weighted Citation Impact
- 0.00