Chromosome-level genome assemblies of Verpa bohemica and Verpa conica

Verpa, commonly known as "early morel" or "false morel", plays an important ecological role and offers considerable economic and medicinal potential. Despite their significance, research on Verpa species, particularly V. bohemica and V. conica, remains limited. In this study, we assembled high-quality sub-chromosomal genomes of six Verpa strains using Nanopore and Illumina sequencing, with average sizes of 44.38 Mb for V. bohemica and 45.40 Mb for V. conica. Specifically, the assemblies of V. bohemica strain 21108 and V. conica strain 21120 were anchored to 26 and 25 chromosomes with Hi-C technologies, respectively. The consensus quality value (QV) of both V. bohemica and V. conica exceeded 40. In addition, an average of 11,024 and 11,052 protein-coding genes were identified for V. bohemica and V. conica, respectively, with BUSCO completeness scores ranging from 98.71% to 99.24%. Overall, these reported genomes will provide valuable genomic resources for the evolution and ecological roles research of Verpa.

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Publication Details

Journal
Scientific Data
Published
2025-05-27
DOI
https://doi.org/10.1038/s41597-025-05224-0
Primary Topic
Insect and Pesticide Research
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article
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article

Chromosome-level genome assemblies of Verpa bohemica and Verpa conica

Fuqiang Yu, Zhuyue Yan, Liyuan Wu, Yingli Cai et al.
Scientific Data
Insect and Pesticide Research
article

Chromosome-level genome assemblies of Verpa bohemica and Verpa conica

Fuqiang Yu, Zhuyue Yan, Liyuan Wu, Yingli Cai, Jin Zhang, Bo Wang, Wei Liu, Xing Guo, Wen‐Hua Sun, Peixin He, Xiaofei Shi
article en

Abstract

Verpa, commonly known as "early morel" or "false morel", plays an important ecological role and offers considerable economic and medicinal potential. Despite their significance, research on Verpa species, particularly V. bohemica and V. conica, remains limited. In this study, we assembled high-quality sub-chromosomal genomes of six Verpa strains using Nanopore and Illumina sequencing, with average sizes of 44.38 Mb for V. bohemica and 45.40 Mb for V. conica. Specifically, the assemblies of V. bohemica strain 21108 and V. conica strain 21120 were anchored to 26 and 25 chromosomes with Hi-C technologies, respectively. The consensus quality value (QV) of both V. bohemica and V. conica exceeded 40. In addition, an average of 11,024 and 11,052 protein-coding genes were identified for V. bohemica and V. conica, respectively, with BUSCO completeness scores ranging from 98.71% to 99.24%. Overall, these reported genomes will provide valuable genomic resources for the evolution and ecological roles research of Verpa.

Scientific DataVol. 12(1)
Kunming Institute of Botany (CN), Minzu University of China (CN), Zhengzhou University of Light Industry (CN), State Ethnic Affairs Commission (CN), Heilongjiang Academy of Forestry (CN), Experimental Center of Forestry in North China (CN)
Zero hunger
Openalex Percentile: Top 90%
Insect and Pesticide Research
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Chromosome-level genome assemblies of Verpa bohemica and Verpa conica — Fuqiang Yu, Zhuyue Yan, et al. · Scientific Data (2025) | TGRS Research Map | TGRS