Bacterial‐Based Molecular Communication: Simulation of a Fixed and Receding Receiver Scenarios in Varied Viscosities and Environmental Conditions

Abstract This study introduces a novel bacterial‐based molecular communication (BBMC) model for nanoscale information exchange, harnessing the chemotactic behavior of Escherichia coli ( E. coli ). A comprehensive 3D simulation framework is developed to analyze the impact of key parameters diffusion coefficient ( D ), chemoattractant release rate ( Q ), receiver (RX) speed ( u ), and initial transmitter‐receiver distance ( d ) on communication performance. Results indicate that lower D values enhance the formation of chemoattractant gradients, leading to improved signal clarity and efficiency. Conversely, higher RX speeds distort these gradients, increasing signal reach time and reducing success rates. Elevated Q values significantly broaden the sensing range and improve reliability, particularly over larger distances, though their effect is diminished at high RX speeds. Notably, success rates drop sharply as d approaches the theoretical sensing threshold, underscoring the critical need for parameter tuning. Experimental results validate these findings and reveal a threshold beyond which bacterial movement becomes random, limiting effective signal transmission. These insights contribute to optimizing BBMC systems for greater efficiency and reliability. Applications include targeted drug delivery, environmental biosensing, and synthetic biology, where precise bacterial signaling is essential. The study also demonstrates simulation as a scalable, cost‐efficient alternative to experimental methods, addressing complexity and feasibility in real‐world scenarios.

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Publication Details

Journal
Advanced Theory and Simulations
Published
2025-05-07
DOI
https://doi.org/10.1002/adts.202500173
Citations
2
Primary Topic
Molecular Communication and Nanonetworks
Type
article
Field-Weighted Citation Impact
1.35

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article

Bacterial‐Based Molecular Communication: Simulation of a Fixed and Receding Receiver Scenarios in Varied Viscosities and Environmental Conditions

İbrahim Işık, Esme Işık, Mehmet Bilal Er, Mustafa Ozan Duman
2 citations
Advanced Theory and Simulations
Molecular Communication and Nanonetworks
1.35
article

Bacterial‐Based Molecular Communication: Simulation of a Fixed and Receding Receiver Scenarios in Varied Viscosities and Environmental Conditions

İbrahim Işık, Esme Işık, Mehmet Bilal Er, Mustafa Ozan Duman
article en
2 citations

Abstract

Abstract This study introduces a novel bacterial‐based molecular communication (BBMC) model for nanoscale information exchange, harnessing the chemotactic behavior of Escherichia coli ( E. coli ). A comprehensive 3D simulation framework is developed to analyze the impact of key parameters diffusion coefficient ( D ), chemoattractant release rate ( Q ), receiver (RX) speed ( u ), and initial transmitter‐receiver distance ( d ) on communication performance. Results indicate that lower D values enhance the formation of chemoattractant gradients, leading to improved signal clarity and efficiency. Conversely, higher RX speeds distort these gradients, increasing signal reach time and reducing success rates. Elevated Q values significantly broaden the sensing range and improve reliability, particularly over larger distances, though their effect is diminished at high RX speeds. Notably, success rates drop sharply as d approaches the theoretical sensing threshold, underscoring the critical need for parameter tuning. Experimental results validate these findings and reveal a threshold beyond which bacterial movement becomes random, limiting effective signal transmission. These insights contribute to optimizing BBMC systems for greater efficiency and reliability. Applications include targeted drug delivery, environmental biosensing, and synthetic biology, where precise bacterial signaling is essential. The study also demonstrates simulation as a scalable, cost‐efficient alternative to experimental methods, addressing complexity and feasibility in real‐world scenarios.

Advanced Theory and SimulationsVol. 8(9)
Bursa Uludağ Üni̇versi̇tesi̇ (TR), Inonu University (TR), Malatya Devlet Hastanesi (TR), Harran University (TR)
Türkiye Bilimsel ve Teknolojik Araştırma Kurumu
Openalex Percentile: Top 20%
Molecular Communication and Nanonetworks
1.35
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