Alchemy of Fungi and AI: Response Surface Methodology and Artificial Neural Network‐Based Optimization of Echinocandin B Production in <i>Aspergillus nidulans</i>

Echinocandin B (ECB) is the precursor of a first-line antifungal, anidulafungin, widely used to treat systemic and invasive fungal infections in nosocomial and community-acquired settings. This potent antifungal is naturally synthesized in Aspergillus nidulans in trace amounts, which can be improved by optimizing growth and physiological conditions. The current study is focused on optimizing the fermentation medium by employing statistical and artificial neural network (ANN)-based model to improve ECB activity in fermentation broth. In the present study, the most significant parameters for ECB activity (i.e., molasses, dextrose, casein, and pH) were identified through the Plackett-Burman design and were further optimized using different statistical models based on central composite design experiments. Process optimization with a reduced quadratic (RQ) model and ANN model (architecture: 4-6-2-1) suggested a 3.64- and 3.03-fold increase in ECB activity, respectively. However, prediction from the RQ model (R<sup>2</sup>: 0.93) could be unreliable when compared to the ANN model (R<sup>2</sup>: 0.99), effectively capturing the complex relationships. The study concludes that the ANN-based predicted model displayed more accuracy and provided optimum levels of the analyzed factors for a 3-fold increase in ECB activity.

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Publication Details

Journal
Biotechnology and Applied Biochemistry
Published
2025-05-25
DOI
https://doi.org/10.1002/bab.2787
Citations
2
Primary Topic
Fungal Biology and Applications
Type
article
Field-Weighted Citation Impact
2.79

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article

Alchemy of Fungi and AI: Response Surface Methodology and Artificial Neural Network‐Based Optimization of Echinocandin B Production in Aspergillus nidulans

Minakshi, Antresh Kumar, Anita Choudhary, Biswanath Mahanty et al.
2 citations
Biotechnology and Applied Biochemistry
Fungal Biology and Applications
2.79
article

Alchemy of Fungi and AI: Response Surface Methodology and Artificial Neural Network‐Based Optimization of Echinocandin B Production in Aspergillus nidulans

Minakshi, Antresh Kumar, Anita Choudhary, Biswanath Mahanty, Nageswar Sahu, Shaurya Prakash, Hemlata Kumari
article en
2 citations

Abstract

Echinocandin B (ECB) is the precursor of a first-line antifungal, anidulafungin, widely used to treat systemic and invasive fungal infections in nosocomial and community-acquired settings. This potent antifungal is naturally synthesized in Aspergillus nidulans in trace amounts, which can be improved by optimizing growth and physiological conditions. The current study is focused on optimizing the fermentation medium by employing statistical and artificial neural network (ANN)-based model to improve ECB activity in fermentation broth. In the present study, the most significant parameters for ECB activity (i.e., molasses, dextrose, casein, and pH) were identified through the Plackett-Burman design and were further optimized using different statistical models based on central composite design experiments. Process optimization with a reduced quadratic (RQ) model and ANN model (architecture: 4-6-2-1) suggested a 3.64- and 3.03-fold increase in ECB activity, respectively. However, prediction from the RQ model (R<sup>2</sup>: 0.93) could be unreliable when compared to the ANN model (R<sup>2</sup>: 0.99), effectively capturing the complex relationships. The study concludes that the ANN-based predicted model displayed more accuracy and provided optimum levels of the analyzed factors for a 3-fold increase in ECB activity.

Biotechnology and Applied BiochemistryVol. 72(6)
Karunya University (IN), Central University of Haryana (IN)
Université de Lausanne
Openalex Percentile: Top 11%
Fungal Biology and Applications
2.79
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