guoyi.run: One-step TNT script for maximum parsimony phylogenetic analysis

Maximum parsimony (MP) analysis remains a cornerstone in phylogenetics, particularly for studies based on morphological characters. TNT is the fastest and most efficient software package available for maximum parsimony (MP) analysis. It is a very flexible and interactive program that can be used for many different tasks, and this very flexibility and number of options are what makes the learning curve steep. Here, I introduce guoyi.run, a TNT script designed to provide a fully automated, one-step pipeline for MP analysis using the TNT macro interpreter language. It can be downloaded from https://github.com/starsareintherose/TNT_Script.

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Publication Details

Journal
Zootaxa
Published
2025-05-26
DOI
https://doi.org/10.11646/zootaxa.5642.1.10
Citations
5
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
4.03
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article

guoyi.run: One-step TNT script for maximum parsimony phylogenetic analysis

Guoyi Zhang
5 citations
Zootaxa
Genomics and Phylogenetic Studies
4.03
article

guoyi.run: One-step TNT script for maximum parsimony phylogenetic analysis

Guoyi Zhang
article en
5 citations

Abstract

Maximum parsimony (MP) analysis remains a cornerstone in phylogenetics, particularly for studies based on morphological characters. TNT is the fastest and most efficient software package available for maximum parsimony (MP) analysis. It is a very flexible and interactive program that can be used for many different tasks, and this very flexibility and number of options are what makes the learning curve steep. Here, I introduce guoyi.run, a TNT script designed to provide a fully automated, one-step pipeline for MP analysis using the TNT macro interpreter language. It can be downloaded from https://github.com/starsareintherose/TNT_Script.

ZootaxaVol. 5642(1)
Australian Museum (AU)
Openalex Percentile: Top 6%
Genomics and Phylogenetic Studies
4.03
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