The Role of Hydrogen Sulfide in the Localization and Structural–Functional Organization of p53 Following Traumatic Brain Injury: Development of a YOLO Model for Detection and Quantification of Apoptotic Nuclei

Traumatic brain injury (TBI) triggers a cascade of molecular and cellular disturbances, including apoptosis, inflammation, and destabilization of neuronal connections. The transcription factor p53 plays a pivotal role in regulating cell fate following brain injury by initiating pro-apoptotic signaling cascades. Hydrogen sulfide (H<sub>2</sub>S) may significantly contribute to the regulation of p53. Using scanning laser confocal microscopy, we found that after TBI, p53 accumulates extensively in the damaged cerebral cortex, showing distinct subcellular localization in neurons and astrocytes. In neurons, p53 predominantly localizes to the cytoplasm, suggesting involvement in mitochondria-dependent apoptosis, whereas in astrocytes, p53 is found in both the nucleus and cytoplasm, indicating possible activation of transcription-dependent apoptotic pathways. Quantitative analysis confirmed a correlation between p53 localization and morphological signs of cell death, as revealed by Sytox Green and Hoechst nuclear staining. Modulating H<sub>2</sub>S levels exerted a marked influence on p53 expression and distribution. Administration of the H<sub>2</sub>S donor sodium thiosulfate (Na<sub>2</sub>S<sub>2</sub>O<sub>3</sub>) reduced the overall number of p53-positive cells, decreased nuclear localization, and lowered the level of apoptosis. Conversely, inhibition of H<sub>2</sub>S synthesis using aminooxyacetic acid (AOAA) led to enhanced p53 expression, increased numbers of cells exhibiting nuclear fragmentation, and a more pronounced apoptotic response. These findings highlight a neuroprotective role for H<sub>2</sub>S, likely mediated through the suppression of p53-dependent cell death pathways. To improve analytical accuracy, we developed a YOLO-based deep-learning model for the automated detection of fragmented nuclei. Additionally, evolutionary and molecular dynamics analysis revealed a high degree of p53 conservation among vertebrates and indicated that, although H<sub>2</sub>S does not form stable complexes with p53, it may modulate its conformational dynamics.

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Publication Details

Journal
International Journal of Molecular Sciences
Published
2025-05-24
DOI
https://doi.org/10.3390/ijms26115066
Citations
3
Primary Topic
Sulfur Compounds in Biology
Type
article
Field-Weighted Citation Impact
3.34
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article

The Role of Hydrogen Sulfide in the Localization and Structural–Functional Organization of p53 Following Traumatic Brain Injury: Development of a YOLO Model for Detection and Quantification of Apoptotic Nuclei

E. Yu. Kirichenko, С. О. Бачурин, Stanislav Rodkin, Chizaram Nwosu et al.
3 citations
International Journal of Molecular Sciences
Sulfur Compounds in Biology
3.34
article

The Role of Hydrogen Sulfide in the Localization and Structural–Functional Organization of p53 Following Traumatic Brain Injury: Development of a YOLO Model for Detection and Quantification of Apoptotic Nuclei

E. Yu. Kirichenko, С. О. Бачурин, Stanislav Rodkin, Chizaram Nwosu, A N Romanov, Антон В. Лисовин, Rozaliia Nabiullina, Marya Kaplya
article en
3 citations

Abstract

Traumatic brain injury (TBI) triggers a cascade of molecular and cellular disturbances, including apoptosis, inflammation, and destabilization of neuronal connections. The transcription factor p53 plays a pivotal role in regulating cell fate following brain injury by initiating pro-apoptotic signaling cascades. Hydrogen sulfide (H<sub>2</sub>S) may significantly contribute to the regulation of p53. Using scanning laser confocal microscopy, we found that after TBI, p53 accumulates extensively in the damaged cerebral cortex, showing distinct subcellular localization in neurons and astrocytes. In neurons, p53 predominantly localizes to the cytoplasm, suggesting involvement in mitochondria-dependent apoptosis, whereas in astrocytes, p53 is found in both the nucleus and cytoplasm, indicating possible activation of transcription-dependent apoptotic pathways. Quantitative analysis confirmed a correlation between p53 localization and morphological signs of cell death, as revealed by Sytox Green and Hoechst nuclear staining. Modulating H<sub>2</sub>S levels exerted a marked influence on p53 expression and distribution. Administration of the H<sub>2</sub>S donor sodium thiosulfate (Na<sub>2</sub>S<sub>2</sub>O<sub>3</sub>) reduced the overall number of p53-positive cells, decreased nuclear localization, and lowered the level of apoptosis. Conversely, inhibition of H<sub>2</sub>S synthesis using aminooxyacetic acid (AOAA) led to enhanced p53 expression, increased numbers of cells exhibiting nuclear fragmentation, and a more pronounced apoptotic response. These findings highlight a neuroprotective role for H<sub>2</sub>S, likely mediated through the suppression of p53-dependent cell death pathways. To improve analytical accuracy, we developed a YOLO-based deep-learning model for the automated detection of fragmented nuclei. Additionally, evolutionary and molecular dynamics analysis revealed a high degree of p53 conservation among vertebrates and indicated that, although H<sub>2</sub>S does not form stable complexes with p53, it may modulate its conformational dynamics.

International Journal of Molecular SciencesVol. 26(11)
Don State Technical University (RU), Bioengineering Center (RU)
Openalex Percentile: Top 9%
Sulfur Compounds in Biology
3.34
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