Gene2role: a role-based gene embedding method for comparative analysis of signed gene regulatory networks
Our method augments the existing toolkit for probing the dynamic regulatory landscape, thereby opening new avenues for understanding gene behavior and interaction patterns across cellular transitions.
Authors
- Fujio Toriumi (ORCID: https://orcid.org/0000-0003-3866-4956)
- Kenta Nakai (ORCID: https://orcid.org/0000-0002-8721-8883)
- Kang Xu (ORCID: https://orcid.org/0000-0003-4543-0998)
- Bowen Liu (ORCID: https://orcid.org/0009-0002-7417-7186)
- Shu Liu (ORCID: https://orcid.org/0000-0001-6907-8787)
- Weihang Zhang (ORCID: https://orcid.org/0009-0005-7308-9418)
- Xin Zeng (ORCID: https://orcid.org/0000-0002-9590-359X)
Institutions
- The University of Tokyo (JP)
Publication Details
- Journal
- BMC Bioinformatics
- Published
- 2025-05-24
- DOI
- https://doi.org/10.1186/s12859-025-06128-x
- Citations
- 1
- Primary Topic
- Gene Regulatory Network Analysis
- Type
- article
- Field-Weighted Citation Impact
- 0.81
Funders
- Japan Science and Technology Agency