A Diagnostic Biomarker Model for Chronic Fibrosis After Liver Transplantation

Background: Liver transplantation is a critical treatment for chronic liver disease; however, rejection and chronic fibrosis of the transplanted liver remain significant challenges. Understanding the mechanisms and high‐level factors contributing to these complications has garnered considerable interest. Methods: Gene expression matrices from homozygous liver samples in the Gene Expression Omnibus database were screened for inclusion. Differentially expressed genes (DEGs) between nonfibrotic and fibrotic liver groups were identified to construct a diagnostic biomarker model using logistic regression and functional enrichment analysis. Additionally, the relationships between immune cell infiltration, fibrosis, and differential gene expression were explored through immune infiltration analysis. Results: The gene expression matrix from frequent liver puncture biopsy samples in the GSE193135 dataset identified 11 DEGs (STMN2, JCHAIN, IGHA1, IGHG3, DCDC2, GSN, KRT7, HLA‐DRB5, CRP, CXCL13, and SPINK1). These genes were utilized to construct a predictive model, achieving robust performance (area under the curve = 0.805, 95% confidence interval: 0.736–0.862). Enrichment and immune infiltration analyses further elucidated the differential gene pathways and immune cell infiltration patterns associated with liver fibrosis. Conclusion: We developed a predictive model for identifying the risk of fibrosis in transplanted livers and investigated the role of immune cell infiltration during fibrosis progression. This model provides valuable insights for understanding and managing fibrosis in liver transplantation.

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Publication Details

Journal
International Journal of Clinical Practice
Published
2025-01-01
DOI
https://doi.org/10.1155/ijcp/6433958
Primary Topic
Liver Disease Diagnosis and Treatment
Type
article
Field-Weighted Citation Impact
0.00

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article

A Diagnostic Biomarker Model for Chronic Fibrosis After Liver Transplantation

Yawei Qian, Junjie Zhou, Zhou Xiao, Yi Liu et al.
International Journal of Clinical Practice
Liver Disease Diagnosis and Treatment
article

A Diagnostic Biomarker Model for Chronic Fibrosis After Liver Transplantation

Yawei Qian, Junjie Zhou, Zhou Xiao, Yi Liu, Mingmang Pan, L Gu
article en

Abstract

Background: Liver transplantation is a critical treatment for chronic liver disease; however, rejection and chronic fibrosis of the transplanted liver remain significant challenges. Understanding the mechanisms and high‐level factors contributing to these complications has garnered considerable interest. Methods: Gene expression matrices from homozygous liver samples in the Gene Expression Omnibus database were screened for inclusion. Differentially expressed genes (DEGs) between nonfibrotic and fibrotic liver groups were identified to construct a diagnostic biomarker model using logistic regression and functional enrichment analysis. Additionally, the relationships between immune cell infiltration, fibrosis, and differential gene expression were explored through immune infiltration analysis. Results: The gene expression matrix from frequent liver puncture biopsy samples in the GSE193135 dataset identified 11 DEGs (STMN2, JCHAIN, IGHA1, IGHG3, DCDC2, GSN, KRT7, HLA‐DRB5, CRP, CXCL13, and SPINK1). These genes were utilized to construct a predictive model, achieving robust performance (area under the curve = 0.805, 95% confidence interval: 0.736–0.862). Enrichment and immune infiltration analyses further elucidated the differential gene pathways and immune cell infiltration patterns associated with liver fibrosis. Conclusion: We developed a predictive model for identifying the risk of fibrosis in transplanted livers and investigated the role of immune cell infiltration during fibrosis progression. This model provides valuable insights for understanding and managing fibrosis in liver transplantation.

International Journal of Clinical PracticeVol. 2025(1)
Wuhan University (CN), Zhongnan Hospital of Wuhan University (CN), Anqing City Hospital (CN), Tongji Hospital (CN), Huazhong University of Science and Technology (CN), Nanjing Medical University (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 83%
Liver Disease Diagnosis and Treatment
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