Mechanism of circRNA_4083 Circularization and Its Role in Regulating Cell Viability
Circular RNAs (circRNAs), a class of covalently closed non-coding RNAs, are pivotal regulators of gene expression and contributors to disease pathogenesis. This study elucidated the biogenesis, functional significance, and regulatory network of circRNA_4083, a novel exon-derived circRNA originating from exons 22 and 23 of the <i>MSH3</i> gene in chicken. Through comprehensive molecular characterization-including Sanger sequencing, RNase R digestion assays, and subcellular localization-we confirmed the robust stability and predominant cytoplasmic localization of circRNA_4083 across diverse chicken tissues. Mechanistic investigations revealed that reverse complementary sequences within flanking intronic regions are indispensable for its circularization, as demonstrated by overexpression plasmids (#1-#4) in DF-1 cells. Functional analyses demonstrated that circRNA_4083 significantly inhibited cell apoptosis and increased cellular viability. Integrative bioinformatics approaches predicted a competing endogenous RNA (ceRNA) network comprising 12 miRNAs and 2132 target genes (FDR < 0.05), with significant enrichment in pathways critical to genomic stability, including non-homologous end joining (NHEJ) and ubiquitin-mediated proteolysis. These findings position circRNA_4083 as a key modulator of cellular viability and genomic integrity, with potential implications for avian leukosis virus-J (ALV-J) pathogenesis and resistance breeding strategies. This work advances our understanding of circRNA-driven regulatory mechanisms in avian species and underscores their relevance in poultry health.
Authors
- Ting Yang (ORCID: https://orcid.org/0000-0002-7027-5179)
- Hao Bai (ORCID: https://orcid.org/0000-0002-5738-4186)
- Guobin Chang (ORCID: https://orcid.org/0000-0001-5712-626X)
- Wenhao Li (ORCID: https://orcid.org/0000-0001-5209-8933)
- Haojie Wang (ORCID: https://orcid.org/0000-0001-8176-5950)
- Lingling Qiu (ORCID: https://orcid.org/0000-0002-4228-6540)
Institutions
- Yangzhou University (CN)
Publication Details
- Journal
- Animals
- Published
- 2025-05-23
- DOI
- https://doi.org/10.3390/ani15111527
- Primary Topic
- Circular RNAs in diseases
- Type
- article
- Field-Weighted Citation Impact
- 0.00