Oral ENPP1 inhibitor designed using generative AI as next generation STING modulator for solid tumors
Despite the STING-type-I interferon pathway playing a key role in effective anti-tumor immunity, the therapeutic benefit of direct STING agonists appears limited. In this study, we use several artificial intelligence techniques and patient-based multi-omics data to show that Ectonucleotide Pyrophosphatase/Phosphodiesterase 1 (ENPP1), which hydrolyzes STING-activating cyclic GMP-AMP (cGAMP), is a safer and more effective STING-modulating target than direct STING agonism in multiple solid tumors. We then leverage our generative chemistry artificial intelligence-based drug design platform to facilitate the design of ISM5939, an orally bioavailable ENPP1-selective inhibitor capable of stabilizing extracellular cGAMP and activating bystander antigen-presenting cells without inducing either toxic inflammatory cytokine release or tumor-infiltrating T-cell death. In murine syngeneic models across cancer types, ISM5939 synergizes with targeting the PD-1/PD-L1 axis and chemotherapy in suppressing tumor growth with good tolerance. Our findings provide evidence supporting ENPP1 as an innate immune checkpoint across solid tumors and reports an AI design-aided ENPP1 inhibitor, ISM5939, as a cutting-edge STING modulator for cancer therapy, paving a path for immunotherapy advancements.
Authors
- Congying Pu (ORCID: https://orcid.org/0009-0008-0635-6223)
- Luoheng Qin
- Frank W. Pun (ORCID: https://orcid.org/0000-0001-8801-6645)
- David Gennert (ORCID: https://orcid.org/0000-0002-8668-3601)
- Alex Zhavoronkov (ORCID: https://orcid.org/0000-0001-7067-8966)
- Yuhang Qian (ORCID: https://orcid.org/0000-0002-1595-1381)
- Huaxing Yu (ORCID: https://orcid.org/0000-0003-3438-3495)
- Man Zhang (ORCID: https://orcid.org/0009-0006-2669-6175)
- Shan Chen (ORCID: https://orcid.org/0000-0001-6405-7813)
- Ling Wang (ORCID: https://orcid.org/0000-0002-0432-6986)
- Rui Wang (ORCID: https://orcid.org/0000-0003-1723-4746)
- Xin Cheng
- Wendong Zhang (ORCID: https://orcid.org/0000-0003-1762-9246)
- Zigong Ning (ORCID: https://orcid.org/0000-0003-2491-0108)
- Xiaoxia Lin (ORCID: https://orcid.org/0000-0002-9459-5820)
- Feng Ren (ORCID: https://orcid.org/0000-0001-9157-9182)
- Hui Cui
Institutions
- Applied Science and Technology Research Institute (CN)
- China Executive Leadership Academy Pudong (CN)
- United States Agency for International Development (US)
- Insilicos (United States) (US)
Publication Details
- Journal
- Nature Communications
- Published
- 2025-05-23
- DOI
- https://doi.org/10.1038/s41467-025-59874-0
- Citations
- 19
- Primary Topic
- interferon and immune responses
- Type
- article
- Field-Weighted Citation Impact
- 15.15
Funders
- Nvidia
- Pharmaron